RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 TNFSF4P23510 183 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 TIGITQ495A1 244 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 H2BFWTQ7Z2G1 175 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 STPG4Q8N801 248 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 TMEM242Q9NWH2 141 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 PIGBOS1A0A0B4J2F0 54 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 K7ESF4 209 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 NUPR1O60356 82 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 MT-CO2P00403 227 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 MRPS11P82912 194 aaKnown RBP8.49□□□□□ -1.05
RNF40-202ENST00000357890 GABRA6Q16445 453 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 RPEL1Q2QD12 228 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 NABP1Q96AH0 204 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 DPRXA6NFQ7 191 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 RPL36A-HNRNPH2H7BZ11 118 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 USF1P22415 310 aaPredicted RBP8.49□□□□□ -1.05
RNF40-202ENST00000357890 F2RP25116 425 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 SRIP30626 198 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 UQCRFS1P47985 274 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 RELBQ01201 579 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 TMEM164Q5U3C3 297 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 RNF2Q99496 336 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 DERL1Q9BUN8 251 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 GPR35Q9HC97 309 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 M0R1X1 148 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SYNGR3O43761 229 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 OR7C2O60412 319 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 LILRA1O75019 489 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 NXPH2O95156 264 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 IL18BPO95998 194 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 PLA2G5P39877 138 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 PMS2CLQ68D20 193 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SPINK14Q6IE38 97 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 LCN12Q6JVE5 192 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SCRT1Q9BWW7 348 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 IGKV1D-13A0A0B4J2D9 117 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 GRPP07492 148 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 IGKV1-13P0DP09 117 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 MAS1LP35410 378 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 ACTL10Q5JWF8 245 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 ACSM6Q6P461 480 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SFRP2Q96HF1 295 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 IL36RNQ9UBH0 155 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SH2D1BO14796 132 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 CA6P23280 308 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 RSPO1Q2MKA7 263 aaPredicted RBP8.48□□□□□ -1.05
RNF40-202ENST00000357890 ZIC4Q8N9L1 334 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 TMEM147Q9BVK8 224 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 NRN1Q9NPD7 142 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 TMEM250H0YL14 139 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 CCL25O15444 150 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SNAI2O43623 268 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 PGLYRP1O75594 196 aaPredicted RBP8.48□□□□□ -1.05
RNF40-202ENST00000357890 RFPL3SP0C7P2 107 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 G6PCP35575 357 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 BPIFB3P59826 476 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 GAGE1Q13065 139 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 OR8B8Q15620 311 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 HES3Q5TGS1 186 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 C6orf15Q6UXA7 325 aaPredicted RBP8.48□□□□□ -1.05
RNF40-202ENST00000357890 Q6ZWC4 215 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 APOBEC3DQ96AK3 386 aaPredicted RBP8.48□□□□□ -1.05
RNF40-202ENST00000357890 LIN7CQ9NUP9 197 aaKnown RBP8.48□□□□□ -1.05
RNF40-202ENST00000357890 PILRBQ9UKJ0 227 aa8.48□□□□□ -1.05
RNF40-202ENST00000357890 SLC22A20A6NK97 555 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 GCNT2Q8N0V5 402 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 FGFBP3Q8TAT2 258 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 FAM122AQ96E09 287 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 LOXL4Q96JB6 756 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 SYNGR1O43759 233 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 NUDT3O95989 172 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 LMO1P25800 156 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 RAB31Q13636 194 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 DTX1Q86Y01 620 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 TUSC5Q8IXB3 177 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
RNF40-202ENST00000357890 ZNF525Q8N782 197 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 OR5B3Q8NH48 314 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 ABCA1O95477 2261 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 VPS13AQ96RL7 3174 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 A0A0G2JMM0 328 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 A0A1W2PPB8 328 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 A0A1W2PRS3 328 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 KIR3DP1A8MWS1 328 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 PATE3B3GLJ2 98 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 CRYABP02511 175 aaKnown RBP8.47□□□□□ -1.05
RNF40-202ENST00000357890 HOXC12P31275 282 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 GNG4P50150 75 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 UCP2P55851 309 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 MRPL49Q13405 166 aaKnown RBP8.47□□□□□ -1.05
RNF40-202ENST00000357890 RIPPLY2Q5TAB7 128 aa8.47□□□□□ -1.05
RNF40-202ENST00000357890 MRPS18CQ9Y3D5 142 aaKnown RBP8.47□□□□□ -1.05
RNF40-202ENST00000357890 hCG_38984A0A1B0GV85 526 aa8.46□□□□□ -1.05
RNF40-202ENST00000357890 KLF7O75840 302 aaPredicted RBP8.46□□□□□ -1.05
RNF40-202ENST00000357890 IGHV3-13P01766 116 aa8.46□□□□□ -1.05
RNF40-202ENST00000357890 IGHV3-7P01780 117 aa8.46□□□□□ -1.05
RNF40-202ENST00000357890 CRYGSP22914 178 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms