RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 YPEL1O60688 119 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 ATG12O94817 140 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 IGKV1-39P01597 117 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 IGKV1D-39P04432 117 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 CD3EP07766 207 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 OR8U9P0C7N5 309 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 SEC11BP0C7V7 166 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 P0C879 139 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 SULT1A2P50226 295 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 EWSR1Q01844 656 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD44-205ENST00000352818 BSPH1Q075Z2 132 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 ZNF585BQ52M93 769 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 SPRNQ5BIV9 151 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 ALKBH2Q6NS38 261 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 IL34Q6ZMJ4 242 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 C1orf229Q6ZS94 237 aaPredicted RBP6.74□□□□□ -1.33
CD44-205ENST00000352818 FOXRED2Q8IWF2 684 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 STPG2Q8N412 459 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 PRR18Q8N4B5 295 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 OR8U1Q8NH10 309 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 ARL11Q969Q4 196 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 GPR146Q96CH1 333 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 C5orf30Q96GV9 206 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 SMIM8Q96KF7 97 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 YPEL2Q96QA6 119 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 RAB40CQ96S21 281 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 HSD17B10Q99714 261 aaKnown RBP6.74□□□□□ -1.33
CD44-205ENST00000352818 GINS3Q9BRX5 216 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 PARP12Q9H0J9 701 aaKnown RBP6.74□□□□□ -1.33
CD44-205ENST00000352818 OR2D2Q9H210 308 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 LINC00574Q9H8X3 128 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 GAB2Q9UQC2 676 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 LRRC30A6NM36 301 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 C17orf100A8MU93 164 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 SIGLEC5O15389 551 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 IGKV1-5P01602 117 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 OR4A8P0C604 315 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 IRF2P14316 349 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 CD80P33681 288 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 SSTR5P35346 364 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 PPP1CCP36873 323 aaKnown RBP6.73□□□□□ -1.33
CD44-205ENST00000352818 EFNA4P52798 201 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 TAS2R30P59541 319 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 VAMP2P63027 116 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 HOXA4Q00056 320 aaPredicted RBP6.73□□□□□ -1.33
CD44-205ENST00000352818 EFNB3Q15768 340 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 ZNF788Q6ZQV5 615 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.73□□□□□ -1.33
CD44-205ENST00000352818 OR52L2PQ8NGH6 319 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 CD300LFQ8TDQ1 290 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 TMED6Q8WW62 240 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 CORO2AQ92828 525 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 GAFA1Q96PS6 74 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 GPHA2Q96T91 129 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 EGLN1Q9GZT9 426 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 ZNF665Q9H7R5 613 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 OR2S2Q9NQN1 319 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 PARP11Q9NR21 331 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 NUP50Q9UKX7 468 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 PPP1R3CQ9UQK1 317 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 MMP24Q9Y5R2 645 aa6.73□□□□□ -1.33
CD44-205ENST00000352818 DSCAML1Q8TD84 2053 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 IGHV3OR15-7A0A075B7D8 119 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 IGSF23A1L1A6 192 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 NKX6-3A6NJ46 265 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 E7EQL1 145 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 TEX46H3BTG2 121 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 WRBO00258 174 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 RBFOX2O43251 390 aaKnown RBP eCLIP6.72□□□□□ -1.33
CD44-205ENST00000352818 SSSCA1O60232 199 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 TFF1P04155 84 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 SPP1P10451 314 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 RAB5CP51148 216 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 RAB7AP51149 207 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 ARHGDIBP52566 201 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 AKR1C2P52895 323 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 LOXL3P58215 753 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 POLR2GP62487 172 aaKnown RBP eCLIP6.72□□□□□ -1.33
CD44-205ENST00000352818 BLOC1S1P78537 153 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 EDDM3AQ14507 147 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 ZNF266Q14584 549 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 SWI5Q1ZZU3 235 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 CXorf66Q5JRM2 361 aaPredicted RBP6.72□□□□□ -1.33
CD44-205ENST00000352818 KPRPQ5T749 579 aaPredicted RBP6.72□□□□□ -1.33
CD44-205ENST00000352818 C1orf87Q8N0U7 546 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 TMEM252Q8N6L7 170 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 LINC01356Q8N9X3 169 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 OR1S2Q8NGQ3 325 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 UBALD1Q8TB05 177 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 MARC2Q969Z3 335 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 AGMATQ9BSE5 352 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 BPESC1Q9GZL8 116 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 WFDC1Q9HC57 220 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 MMP26Q9NRE1 261 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 CBLN4Q9NTU7 201 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 CALYQ9NYX4 217 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 WSB1Q9Y6I7 421 aa6.72□□□□□ -1.33
CD44-205ENST00000352818 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms