RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 MRGPRDQ8TDS7 321 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 TCTEX1D2Q8WW35 142 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 CCL13Q99616 98 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
UBA3-201ENST00000349511 H3BP45 60 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 CLN5O75503 358 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 LY6HO94772 140 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 HSPB1P04792 205 aaKnown RBP11.12□□□□□ -0.63
UBA3-201ENST00000349511 FABP1P07148 127 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 CD55P08174 381 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 UBE2KP61086 200 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 HLA-DRB3P79483 266 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 TLE4Q04727 773 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 H1FOOQ8IZA3 346 aaPredicted RBP11.12□□□□□ -0.63
UBA3-201ENST00000349511 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 FGFRL1Q8N441 504 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 CYB561D1Q8N8Q1 229 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 CLDND2Q8NHS1 167 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 TMEM204Q9BSN7 226 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 SVEP1Q4LDE5 3571 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 TRBV6-6A0A0A6YYG2 114 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
UBA3-201ENST00000349511 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 TXNL1O43396 289 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 ZNF737O75373 536 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 ADH4P08319 380 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 S100GP29377 79 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 RPS10P46783 165 aaKnown RBP11.12□□□□□ -0.63
UBA3-201ENST00000349511 EDDM3BP56851 147 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
UBA3-201ENST00000349511 TMEM267Q0VDI3 215 aaPredicted RBP11.12□□□□□ -0.63
UBA3-201ENST00000349511 TESK1Q15569 626 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 EFNB3Q15768 340 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 OR51H1Q8NH63 302 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 OR10J5Q8NHC4 309 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 RFESDQ8TAC1 157 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 WSB1Q9Y6I7 421 aa11.12□□□□□ -0.63
UBA3-201ENST00000349511 DOPEY1Q5JWR5 2465 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 A0A1B0GU03 582 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 TMEM30CPA0ZSE6 113 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 LINC00587B1AMM8 73 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 DFFBO76075 338 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 HBE1P02100 147 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 SOD3P08294 240 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 RAB2AP61019 212 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 DLK1P80370 383 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 IZUMO4Q1ZYL8 232 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 STX12Q86Y82 276 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 THNSL2Q86YJ6 484 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 FAM216BQ8N7L0 139 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 OR13A1Q8NGR1 328 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 Q8TCH9 128 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 RBMXL1Q96E39 390 aaKnown RBP11.11□□□□□ -0.63
UBA3-201ENST00000349511 TVP23CQ96ET8 276 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 CSMD2Q7Z408 3487 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 A0A087WWC5 75 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 OOEPA6NGQ2 149 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 LRRC30A6NM36 301 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 TMPRSS2O15393 492 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 SERPINE2P07093 398 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 SSTR5P35346 364 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 LTC4SQ16873 150 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 ZNF343Q6P1L6 599 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 Q6ZRM9 215 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 OR1L1Q8NH94 360 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 TMEM106BQ9NUM4 274 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
UBA3-201ENST00000349511 FAM208BQ5VWN6 2430 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 TMEM178BH3BS89 294 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
UBA3-201ENST00000349511 IFNA5P01569 189 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 CXCL1P09341 107 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 SLC25A6P12236 298 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 COL8A2P25067 703 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 KHDC3LQ587J8 217 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 STUMQ69YW2 141 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 SLC25A24Q6NUK1 477 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 OR10V1Q8NGI7 309 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 RNASE11Q8TAA1 199 aaKnown RBP11.1□□□□□ -0.63
UBA3-201ENST00000349511 RAB40CQ96S21 281 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
UBA3-201ENST00000349511 LAMP3Q9UQV4 416 aa11.1□□□□□ -0.63
UBA3-201ENST00000349511 LOC102723971A0A1B0GUV8 181 aa11.09□□□□□ -0.63
UBA3-201ENST00000349511 C12orf77C9JDV5 145 aa11.09□□□□□ -0.63
UBA3-201ENST00000349511 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
UBA3-201ENST00000349511 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
UBA3-201ENST00000349511 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
UBA3-201ENST00000349511 ELOBQ15370 118 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms