RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 BTBD17A6NE02 478 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 HMSDA8MTL9 139 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 PPYP01298 95 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 NFYBP25208 207 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 HERV-K104P61576 105 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 HLA-DRB3P79483 266 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 MINOS1Q5TGZ0 78 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 KCTD9Q7L273 389 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 SGPP2Q8IWX5 399 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 SLC38A6Q8IZM9 456 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 OR4A4PQ8NGN8 299 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 TOMM40LQ969M1 308 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 RAB18Q9NP72 206 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 SERTAD4Q9NUC0 356 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 MINOS1-NBL1R4GNA1 71 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 LOC105371267A0A1B0GV96 52 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 SH2D7A6NKC9 451 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-201ENST00000346213 CCSO14618 274 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 TUSC2O75896 110 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 DIRAS3O95661 229 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 NFYAP23511 347 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-201ENST00000346213 FXYD4P59646 89 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 BLCAPP62952 87 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 FGL1Q08830 312 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 HERPUD1Q15011 391 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 CABLES2Q9BTV7 478 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 IDI2-AS1Q9NZ38 188 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 PSG11Q9UQ72 335 aa12.86□□□□□ -0.35
RAB5C-201ENST00000346213 IGHV3-43A0A0B4J1X8 118 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 IGKV1-6A0A0C4DH72 117 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 SLC31A2O15432 143 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 TSPAN15O95858 294 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 AMY1AP04745 511 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 IGHV3-43DP0DP04 118 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-201ENST00000346213 HTR1DP28221 377 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 GNG10P50151 68 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 DYNLT3P51808 116 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 TPTE2P1Q5T6R2 138 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 SGMS2Q8NHU3 365 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-201ENST00000346213 GALNT14Q96FL9 552 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
RAB5C-201ENST00000346213 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
RAB5C-201ENST00000346213 TEX13DA0A0J9YY54 714 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1B0GUS0 222 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 BET1O15155 118 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 KCNJ3P48549 501 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 PIGPP57054 158 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 LOXL3P58215 753 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 ABCA11PQ4W5N1 156 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 C11orf44Q8N8P7 122 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 NAA60Q9H7X0 242 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 DPM3Q9P2X0 92 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 KCNIP3Q9Y2W7 256 aa12.84□□□□□ -0.35
RAB5C-201ENST00000346213 TRBV6-7A0A0A0MS04 114 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 TRAV14DV4A0A0A6YYC5 116 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1W2PPI3 338 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 C12orf77C9JDV5 145 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 C4BPBP20851 252 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 CYCSP99999 105 aaKnown RBP12.83□□□□□ -0.35
RAB5C-201ENST00000346213 Q8N2B8 174 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 CCDC71LQ8N9Z2 235 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 RTN4IP1Q8WWV3 396 aaPredicted RBP12.83□□□□□ -0.35
RAB5C-201ENST00000346213 CFHR4Q92496 578 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 NMES1Q9C002 83 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 SLC2A9Q9NRM0 540 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 COMMD9Q9P000 198 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.35
RAB5C-201ENST00000346213 TMEM30CPA0ZSE6 113 aa12.83□□□□□ -0.36
RAB5C-201ENST00000346213 J3QR06 171 aa12.83□□□□□ -0.36
RAB5C-201ENST00000346213 SLC25A4P12235 298 aa12.83□□□□□ -0.36
RAB5C-201ENST00000346213 KLHDC1Q8N7A1 406 aa12.83□□□□□ -0.36
RAB5C-201ENST00000346213 OR1L1Q8NH94 360 aa12.83□□□□□ -0.36
RAB5C-201ENST00000346213 SEC22AQ96IW7 307 aa12.83□□□□□ -0.36
RAB5C-201ENST00000346213 C5orf51A6NDU8 294 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 L7N2F9 121 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 F2RL2O00254 374 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 CXCL2P19875 107 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 RND3P61587 244 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 GNMTQ14749 295 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 HMGN3Q15651 99 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 TMEM65Q6PI78 240 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 H1FOOQ8IZA3 346 aaPredicted RBP12.82□□□□□ -0.36
RAB5C-201ENST00000346213 PRR13Q9NZ81 148 aa12.82□□□□□ -0.36
RAB5C-201ENST00000346213 ADAP1O75689 374 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 GNRHRP30968 328 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 ZNF134P52741 427 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 TMEM187Q14656 261 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 PHLDA2Q53GA4 152 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 C11orf87Q6NUJ2 197 aa12.81□□□□□ -0.36
RAB5C-201ENST00000346213 TREML4Q6UXN2 200 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms