RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 STUB1Q9UNE7 303 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 NOTOA8MTQ0 251 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 MRPS14O60783 128 aaKnown RBP9.58□□□□□ -0.88
SGCA-202ENST00000344627 GALP22466 123 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 PITPNAQ00169 270 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 TAGLNQ01995 201 aaKnown RBP9.58□□□□□ -0.88
SGCA-202ENST00000344627 ARL6IP1Q15041 203 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 UBE2UQ5VVX9 321 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 POC5Q8NA72 575 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 ADTRPQ96IZ2 230 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 CENPOQ9BU64 300 aa9.58□□□□□ -0.88
SGCA-202ENST00000344627 TXNL4BQ9NX01 149 aaKnown RBP9.58□□□□□ -0.88
SGCA-202ENST00000344627 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
SGCA-202ENST00000344627 MPPED1O15442 326 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 CRYZL1O95825 349 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 APELAP0DMC3 54 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 RRASP10301 218 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 GNG2P59768 71 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 MXD1Q05195 221 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 VMA21Q3ZAQ7 101 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 NR2C2APQ86WQ0 139 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 FCGR1BQ92637 280 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 RHOVQ96L33 236 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 RSRP1Q9BUV0 290 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 ELOVL1Q9BW60 279 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 COA4Q9NYJ1 87 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 TNCP24821 2201 aa9.57□□□□□ -0.88
SGCA-202ENST00000344627 IGKV1D-8A0A087WSZ0 117 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 A0A0G2JLM5 398 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 LOC100506127A0A0U1RQW1 187 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 SRRM4A7MD48 611 aaKnown RBP9.56□□□□□ -0.88
SGCA-202ENST00000344627 A8MZ25 164 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 H3BUA1 57 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 TUSC2O75896 110 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 DIRAS3O95661 229 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 IGLV2-23P01705 113 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 GP9P14770 177 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 SPNP16150 400 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 NFYAP23511 347 aaPredicted RBP9.56□□□□□ -0.88
SGCA-202ENST00000344627 DTYMKP23919 212 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 FGF9P31371 208 aaPredicted RBP9.56□□□□□ -0.88
SGCA-202ENST00000344627 TNXAQ16473 311 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 SRSF7Q16629 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
SGCA-202ENST00000344627 TMEM177Q53S58 311 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 OR2B11Q5JQS5 317 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 CASC10Q5T4H9 136 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 HACD4Q5VWC8 232 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 ACSM6Q6P461 480 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 IDO2Q6ZQW0 420 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 TPRA1Q86W33 373 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 H1FOOQ8IZA3 346 aaPredicted RBP9.56□□□□□ -0.88
SGCA-202ENST00000344627 NUDCD2Q8WVJ2 157 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 ACOT12Q8WYK0 555 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 C5orf30Q96GV9 206 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 TMEM68Q96MH6 324 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 OR51E2Q9H255 320 aa9.56□□□□□ -0.88
SGCA-202ENST00000344627 TMEM235A6NFC5 223 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 MSGN1A6NI15 193 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 FCGR3BO75015 233 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 ACTL6BO94805 426 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 TNFAIP8O95379 198 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 CRYGBP07316 175 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 CTXN2P0C2S0 81 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 LYL1P12980 280 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 DUTP33316 252 aaKnown RBP9.55□□□□□ -0.88
SGCA-202ENST00000344627 SDC2P34741 201 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 DEFA5Q01523 94 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 SFXN4Q6P4A7 337 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 ZNF773Q6PK81 442 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 Q6ZS49 121 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 ANKRD13BQ86YJ7 626 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 TEX45Q8NA69 505 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 LGALS14Q8TCE9 139 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 RANGRFQ9HD47 186 aaPredicted RBP9.55□□□□□ -0.88
SGCA-202ENST00000344627 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
SGCA-202ENST00000344627 LINC00473A8K010 186 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 SCGNO76038 276 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 BRI3O95415 125 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 ZP3P21754 424 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 UBE2KP61086 200 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 PRSS8Q16651 343 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 KCTD21Q4G0X4 260 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 IDNKQ5T6J7 187 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 OVCH2Q7RTZ1 564 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 HAPLN4Q86UW8 402 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 ZNF645Q8N7E2 425 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 DCSTAMPQ9H295 470 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 RHBDL2Q9NX52 303 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 OR2W1Q9Y3N9 320 aa9.54□□□□□ -0.88
SGCA-202ENST00000344627 TRAV18A0A075B6X5 111 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 CLEC2LP0C7M8 214 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 CD36P16671 472 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 AADACP22760 399 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 ARPC4P59998 168 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms