RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 AGMATQ9BSE5 352 aa11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 SDHAF2Q9NX18 166 aa11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 CTSZQ9UBR2 303 aa11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 UBQLN2Q9UHD9 624 aa11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 GAB2Q9UQC2 676 aa11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 LSM5Q9Y4Y9 91 aaKnown RBP11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 POMT1Q9Y6A1 747 aa11.03□□□□□ -0.64
HERPUD1-202ENST00000344114 MEX3AA1L020 520 aaKnown RBP11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 E5RGE8 158 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ST8SIA3O43173 380 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ATG12O94817 140 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 IGHV2-70P01814 119 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 MBPP02686 304 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 COL8A2P25067 703 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 EXOSC2Q13868 293 aaKnown RBP11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 LYPD2Q6UXB3 125 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 TEX29Q8N6K0 151 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 RNASE11Q8TAA1 199 aaKnown RBP11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 TCTEX1D2Q8WW35 142 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 RAB39BQ96DA2 213 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF714Q96N38 554 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ARPC5LQ9BPX5 153 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ABHD14AQ9BUJ0 271 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF747Q9BV97 191 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 PLEKHA2Q9HB19 425 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 LPAR2Q9HBW0 351 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 RNF150Q9ULK6 438 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 NSG2Q9Y328 171 aa11.02□□□□□ -0.65
HERPUD1-202ENST00000344114 TGP01266 2768 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 TRBV23-1A0A0A0MS06 115 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 TRAV20A0A0B4J274 112 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 A0A1B0GU03 582 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 AVPP01185 164 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 IGKV1-39P01597 117 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 IGKV1D-39P04432 117 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 NKX2-1P43699 371 aaPredicted RBP11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 AKR1C2P52895 323 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 LMO4P61968 165 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF585BQ52M93 769 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 FOXRED2Q8IWF2 684 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 FGFRL1Q8N441 504 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 CD300LFQ8TDQ1 290 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 IFI27L2Q9H2X8 130 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 NARFLQ9H6Q4 476 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 C19orf12Q9NSK7 152 aa11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 RPUSD1Q9UJJ7 312 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-202ENST00000344114 LOC105371242A0A075B767 164 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 DVL1O14640 695 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 GPR37O15354 613 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 FCN3O75636 299 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 PVALBP20472 110 aaPredicted RBP11□□□□□ -0.65
HERPUD1-202ENST00000344114 OMGP23515 440 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 HTR2BP41595 481 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 KIR2DS2P43631 304 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 TMEM33P57088 247 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF273Q14593 569 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 TMEM155Q4W5P6 130 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 HEPN1Q6WQI6 88 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 FAM219AQ8IW50 185 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF439Q8NDP4 499 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 H1FXQ92522 213 aaKnown RBP11□□□□□ -0.65
HERPUD1-202ENST00000344114 RRNAD1Q96FB5 475 aaKnown RBP11□□□□□ -0.65
HERPUD1-202ENST00000344114 TIMD4Q96H15 378 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 ESM1Q9NQ30 184 aa11□□□□□ -0.65
HERPUD1-202ENST00000344114 RCL1Q9Y2P8 373 aaKnown RBP11□□□□□ -0.65
HERPUD1-202ENST00000344114 MMP9P14780 707 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 NFYBP25208 207 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 DUTP33316 252 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 LPAR6P43657 344 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 P2RY1P47900 373 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 RPL30P62888 115 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 PRAMEF5Q5TYX0 476 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 BTNL3Q6UXE8 466 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 SPAG16Q8N0X2 631 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 SCARB1Q8WTV0 552 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 ST8SIA2Q92186 375 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 RAB1CQ92928 201 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 GPR146Q96CH1 333 aa10.99□□□□□ -0.65
HERPUD1-202ENST00000344114 ARHGAP32A7KAX9 2087 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 MSGN1A6NI15 193 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 LINC00473A8K010 186 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 TAAR5O14804 337 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 RAB29O14966 203 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.651e-7■■■■■ 34.3
HERPUD1-202ENST00000344114 PITX3O75364 302 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 CFDP00746 253 aaPredicted RBP10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 HKR1P10072 659 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 RPL12P30050 165 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 DEFA6Q01524 100 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 TMEM200BQ69YZ2 307 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 SLC25A48Q6ZT89 311 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 OR8B3Q8NGG8 313 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 STOML3Q8TAV4 291 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 ADTRPQ96IZ2 230 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 OR8B2Q96RD0 313 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms