RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 PGPEP1LA6NFU8 196 aa20.06■□□□□ 0.8
NELFB-201ENST00000343053 PFN1P07737 140 aaKnown RBP20.06■□□□□ 0.8
NELFB-201ENST00000343053 GPX4P36969 197 aaPredicted RBP20.06■□□□□ 0.8
NELFB-201ENST00000343053 VWA1Q6PCB0 445 aa20.06■□□□□ 0.8
NELFB-201ENST00000343053 ZNF709Q8N972 641 aa20.06■□□□□ 0.8
NELFB-201ENST00000343053 SDSLQ96GA7 329 aa20.06■□□□□ 0.8
NELFB-201ENST00000343053 WFIKKN1Q96NZ8 548 aa20.06■□□□□ 0.8
NELFB-201ENST00000343053 EP300Q09472 2414 aaPredicted RBP20.05■□□□□ 0.8
NELFB-201ENST00000343053 MARCH11A6NNE9 402 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 CD59P13987 128 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 EDDM3BP56851 147 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 HES3Q5TGS1 186 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 DERL1Q9BUN8 251 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 GYPAP02724 150 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 TGFBR3Q03167 851 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 EIF4EBP1Q13541 118 aaPredicted RBP20.05■□□□□ 0.8
NELFB-201ENST00000343053 WDR82Q6UXN9 313 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 ACP7Q6ZNF0 438 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 TMEM37Q8WXS4 190 aa20.05■□□□□ 0.8
NELFB-201ENST00000343053 COX5AP20674 150 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 SOX8P57073 446 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 ZNF66Q6ZN08 573 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 OR5B12Q96R08 314 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 CTDSP1Q9GZU7 261 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 TET2Q6N021 2002 aaPredicted RBP20.04■□□□□ 0.8
NELFB-201ENST00000343053 OR9G9P0C7N8 305 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 NPPCP23582 126 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 GABRA6Q16445 453 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 FER1L6-AS2Q96M78 137 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 ACTR3CQ9C0K3 210 aaPredicted RBP20.04■□□□□ 0.8
NELFB-201ENST00000343053 PATZ1Q9HBE1 687 aaKnown RBP20.04■□□□□ 0.8
NELFB-201ENST00000343053 RYDENQ9NUL5 291 aaKnown RBP20.04■□□□□ 0.8
NELFB-201ENST00000343053 TIMM9Q9Y5J7 89 aa20.04■□□□□ 0.8
NELFB-201ENST00000343053 PPP5D1E7EU14 171 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 IFNL4K9M1U5 179 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 CST9LP1Q5W188 147 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 GMPPAQ96IJ6 420 aaPredicted RBP20.03■□□□□ 0.8
NELFB-201ENST00000343053 PARD6GQ9BYG4 376 aaPredicted RBP20.03■□□□□ 0.8
NELFB-201ENST00000343053 HES4Q9HCC6 221 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 FUT9Q9Y231 359 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 PTPRBP23467 1997 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 XKRY2A2RUG3 117 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 FCGR3BO75015 233 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 CLDN14O95500 239 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 ATP5G3P48201 142 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 FAM3BP58499 235 aaPredicted RBP20.03■□□□□ 0.8
NELFB-201ENST00000343053 SRD5A3Q9H8P0 318 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 CEP250Q9BV73 2442 aa20.03■□□□□ 0.8
NELFB-201ENST00000343053 C11orf94C9JXX5 98 aa20.02■□□□□ 0.8
NELFB-201ENST00000343053 HNF1AP20823 631 aa20.02■□□□□ 0.8
NELFB-201ENST00000343053 CNOT1A5YKK6 2376 aaKnown RBP20.02■□□□□ 0.8
NELFB-201ENST00000343053 CDC34P49427 236 aaPredicted RBP20.02■□□□□ 0.8
NELFB-201ENST00000343053 SLC35E4Q6ICL7 350 aa20.02■□□□□ 0.8
NELFB-201ENST00000343053 MEGF10Q96KG7 1140 aa20.02■□□□□ 0.8
NELFB-201ENST00000343053 PITPNC1Q9UKF7 332 aa20.02■□□□□ 0.8
NELFB-201ENST00000343053 AMBPP02760 352 aa20.01■□□□□ 0.79
NELFB-201ENST00000343053 ACSF3Q4G176 576 aaPredicted RBP20.01■□□□□ 0.79
NELFB-201ENST00000343053 R3HDM4Q96D70 268 aa20.01■□□□□ 0.79
NELFB-201ENST00000343053 C15orf62A8K5M9 175 aa20.01■□□□□ 0.79
NELFB-201ENST00000343053 AGMATQ9BSE5 352 aa20.01■□□□□ 0.79
NELFB-201ENST00000343053 IGHV3OR15-7A0A075B7D8 119 aa20■□□□□ 0.79
NELFB-201ENST00000343053 CDX4O14627 284 aaPredicted RBP20■□□□□ 0.79
NELFB-201ENST00000343053 HOXC12P31275 282 aa20■□□□□ 0.79
NELFB-201ENST00000343053 FOXF2Q12947 444 aa20■□□□□ 0.79
NELFB-201ENST00000343053 UTF1Q5T230 341 aa20■□□□□ 0.79
NELFB-201ENST00000343053 CD177Q8N6Q3 437 aa20■□□□□ 0.79
NELFB-201ENST00000343053 C14orf144Q96I85 54 aa20■□□□□ 0.79
NELFB-201ENST00000343053 WASF3Q9UPY6 502 aa20■□□□□ 0.79
NELFB-201ENST00000343053 MGAQ8IWI9 3026 aa20■□□□□ 0.79
NELFB-201ENST00000343053 TMEM210A6NLX4 147 aa20■□□□□ 0.79
NELFB-201ENST00000343053 SELLP14151 372 aa20■□□□□ 0.79
NELFB-201ENST00000343053 RPL39P5Q59GN2 51 aa20■□□□□ 0.79
NELFB-201ENST00000343053 TMEM183AQ8IXX5 376 aa20■□□□□ 0.79
NELFB-201ENST00000343053 LEAP2Q969E1 77 aa20■□□□□ 0.79
NELFB-201ENST00000343053 TMEM250H0YL14 139 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 RNF224P0DH78 156 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 CENPVQ7Z7K6 275 aaPredicted RBP19.99■□□□□ 0.79
NELFB-201ENST00000343053 OR1P1Q8NH06 330 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 LRRC29Q8WV35 223 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 NEIL1Q96FI4 390 aaPredicted RBP19.99■□□□□ 0.79
NELFB-201ENST00000343053 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.99■□□□□ 0.79
NELFB-201ENST00000343053 HRASP01112 189 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 CECR9P0C854 216 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 CCL11P51671 97 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 FAM214BQ7L5A3 538 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 ZBTB34Q8NCN2 500 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 ZDHHC11Q9H8X9 412 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 GNG12Q9UBI6 72 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 TRAV3A0A0B4J244 114 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 RAB29O14966 203 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 PROP1O75360 226 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 IFNA10P01566 189 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 ATP6V1FQ16864 119 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 CXXC4Q9H2H0 198 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 MANBALQ9NQG1 85 aa19.99■□□□□ 0.79
NELFB-201ENST00000343053 A0A0U1RQK1 487 aa19.98■□□□□ 0.79
NELFB-201ENST00000343053 FAM78BQ5VT40 261 aa19.98■□□□□ 0.79
NELFB-201ENST00000343053 Q8TCH9 128 aa19.98■□□□□ 0.79
NELFB-201ENST00000343053 A0A1B0GUS0 222 aa19.98■□□□□ 0.79
NELFB-201ENST00000343053 PRAMEF5Q5TYX0 476 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms