RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 NSG2Q9Y328 171 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 AUP1Q9Y679 476 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 SAA4P35542 130 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 PRRX1P54821 245 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 PRSS57Q6UWY2 283 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 ZNF66Q6ZN08 573 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 FOXRED2Q8IWF2 684 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 LGI3Q8N145 548 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 ZBTB34Q8NCN2 500 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 BEND2Q8NDZ0 799 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 RBPMSQ93062 196 aaKnown RBP11.22□□□□□ -0.61
PMS1-201ENST00000342075 TMEM56Q96MV1 263 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 PDCD10Q9BUL8 212 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 LY6LH3BQJ8 138 aa11.21□□□□□ -0.61
PMS1-201ENST00000342075 H7C2Y5 167 aa11.21□□□□□ -0.61
PMS1-201ENST00000342075 CATR1Q13166 79 aa11.21□□□□□ -0.61
PMS1-201ENST00000342075 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
PMS1-201ENST00000342075 RPEQ96AT9 228 aa11.21□□□□□ -0.61
PMS1-201ENST00000342075 HEXA-AS1Q9H8Q6 139 aa11.21□□□□□ -0.61
PMS1-201ENST00000342075 UNKLQ9H9P5 680 aaKnown RBP11.21□□□□□ -0.61
PMS1-201ENST00000342075 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.62
PMS1-201ENST00000342075 H0YJW9 148 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 CNTFRP26992 372 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 HTR1DP28221 377 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.62
PMS1-201ENST00000342075 MOB3BQ86TA1 216 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 C8orf31Q8N9H6 132 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 FOXC2Q99958 501 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 NF1P21359 2839 aa11.21□□□□□ -0.62
PMS1-201ENST00000342075 ANK3Q12955 4377 aaKnown RBP11.2□□□□□ -0.62
PMS1-201ENST00000342075 TRAV3A0A0B4J244 114 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 AKR1C2P52895 323 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 C11orf91Q3C1V1 193 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 OR11H4Q8NGC9 324 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 OR2T35Q8NGX2 323 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 SMR3AQ99954 134 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 SLC35D1Q9NTN3 355 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 TIMM23O14925 209 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 ZNF137PP52743 207 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 IAH1Q2TAA2 248 aaPredicted RBP11.2□□□□□ -0.62
PMS1-201ENST00000342075 TPTE2P1Q5T6R2 138 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.2□□□□□ -0.62
PMS1-201ENST00000342075 GRPEL2Q8TAA5 225 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 GPR146Q96CH1 333 aa11.2□□□□□ -0.62
PMS1-201ENST00000342075 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 RNF212BA8MTL3 300 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 SCGB1D2O95969 90 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 MYOD1P15172 320 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 HNF4GQ14541 408 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 RAB18Q9NP72 206 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 GAB2Q9UQC2 676 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 HNRNPCP07910 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
PMS1-201ENST00000342075 TRAPPC2P0DI81 140 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 TRAPPC2BP0DI82 140 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 RNASE11Q8TAA1 199 aaKnown RBP11.19□□□□□ -0.62
PMS1-201ENST00000342075 C1orf159Q96HA4 380 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 A0A0B4J2A0 478 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 THBS3P49746 956 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 UBE2E1P51965 193 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 OR2B8PP59922 312 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 SPINK9Q5DT21 86 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 GSG1LQ6UXU4 331 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 SHPKQ9UHJ6 478 aa11.19□□□□□ -0.62
PMS1-201ENST00000342075 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 OR2A4O95047 310 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 MSMO1Q15800 293 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 PPP1R1CQ8WVI7 109 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 R3HDM4Q96D70 268 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 OR2A7Q96R45 310 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 RANBP3Q9H6Z4 567 aaPredicted RBP11.18□□□□□ -0.62
PMS1-201ENST00000342075 TPSG1Q9NRR2 321 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 CACNG5Q9UF02 275 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 PRELID3BQ9Y3B1 194 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 A0A0U1RQK1 487 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 NPFFO15130 113 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 LGALS4P56470 323 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 CXorf66Q5JRM2 361 aaPredicted RBP11.18□□□□□ -0.62
PMS1-201ENST00000342075 FAM120AOSQ5T036 256 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 MAGT1Q9H0U3 335 aa11.18□□□□□ -0.62
PMS1-201ENST00000342075 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 LEUTXA8MZ59 168 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 RAB32Q13637 225 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 BCL6BQ8N143 479 aaPredicted RBP11.17□□□□□ -0.62
PMS1-201ENST00000342075 DMBX1Q8NFW5 382 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 HLA-GP17693 338 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 VDAC1P21796 283 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 S100A10P60903 97 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms