RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PTX4Q96A99 478 aa8.23□□□□□ -1.09
TPM3-207ENST00000341372 MMP28Q9H239 520 aa8.23□□□□□ -1.09
TPM3-207ENST00000341372 ABRACLQ9P1F3 81 aa8.23□□□□□ -1.09
TPM3-207ENST00000341372 SPATA2Q9UM82 520 aa8.23□□□□□ -1.09
TPM3-207ENST00000341372 TCF19Q9Y242 345 aa8.23□□□□□ -1.09
TPM3-207ENST00000341372 A0A087X0K7 114 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 TRBV6-6A0A0A6YYG2 114 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 OOSP1A8MZH6 123 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 J3QR06 171 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 PLA2G10O15496 165 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 NAPSAO96009 420 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 NFYBP25208 207 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 RFX2P48378 723 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 RAG2P55895 527 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 NKAPLQ5M9Q1 402 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 ZNF880Q6PDB4 577 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 C6orf201Q7Z4U5 140 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 LINC00311Q8N616 119 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 GDPD1Q8N9F7 314 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 OR4F5Q8NH21 305 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 OR4K15Q8NH41 348 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 RFESDQ8TAC1 157 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 LGALS14Q8TCE9 139 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 CCDC107Q8WV48 283 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 TRAPPC2LQ9UL33 140 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 PSG11Q9UQ72 335 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 AMMECR1Q9Y4X0 333 aaPredicted RBP8.22□□□□□ -1.09
TPM3-207ENST00000341372 LEUTXA8MZ59 168 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 TOR1AO14656 332 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 SOCS1O15524 211 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 CRYBA1P05813 215 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 S100A9P06702 114 aaKnown RBP8.22□□□□□ -1.09
TPM3-207ENST00000341372 RCC1P18754 421 aaPredicted RBP8.22□□□□□ -1.09
TPM3-207ENST00000341372 BLVRBP30043 206 aaPredicted RBP8.22□□□□□ -1.09
TPM3-207ENST00000341372 CEACAM3P40198 252 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 TMEM50BP56557 158 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 FAM189A2Q15884 450 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 TPTE2P1Q5T6R2 138 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 Q6ZPA2 131 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 TAF15Q92804 592 aaKnown RBP eCLIP8.22□□□□□ -1.09
TPM3-207ENST00000341372 C16orf95Q9H693 158 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 RAB18Q9NP72 206 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 RAB22AQ9UL26 194 aa8.22□□□□□ -1.09
TPM3-207ENST00000341372 A6NDX4 124 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 RRHO14718 337 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 SPINT2O43291 252 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 CHST1O43916 411 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 HLA-DQB1P01920 261 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 HBZP02008 142 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 APOA1P02647 267 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 MDKP21741 143 aaPredicted RBP8.21□□□□□ -1.1
TPM3-207ENST00000341372 PTBP1P26599 531 aaKnown RBP eCLIP8.21□□□□□ -1.12e-9■■■■■ 36.6
TPM3-207ENST00000341372 CDX1P47902 265 aaPredicted RBP8.21□□□□□ -1.1
TPM3-207ENST00000341372 HMGN3Q15651 99 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 Q6ZSV7 163 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 MOB1BQ7L9L4 216 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 STHQ8IWL8 128 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 ZNF439Q8NDP4 499 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 FAAP24Q9BTP7 215 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 ZNF747Q9BV97 191 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 RIMS4Q9H426 269 aaPredicted RBP8.21□□□□□ -1.1
TPM3-207ENST00000341372 RANBP3Q9H6Z4 567 aaPredicted RBP8.21□□□□□ -1.1
TPM3-207ENST00000341372 PLEKHJ1Q9NW61 149 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 HILPDAQ9Y5L2 63 aa8.21□□□□□ -1.1
TPM3-207ENST00000341372 FAM25AB3EWG3 89 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 FAM25CB3EWG5 89 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 FAM25GB3EWG6 89 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 SDCBPO00560 298 aaPredicted RBP8.2□□□□□ -1.1
TPM3-207ENST00000341372 NXPH3O95157 252 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 EFNB2P52799 333 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 LY6EQ16553 131 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 LTC4SQ16873 150 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 PYDC2Q56P42 97 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 PLAC9Q5JTB6 97 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 LY6G6FQ5SQ64 297 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 OR1L1Q8NH94 360 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 LEAP2Q969E1 77 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
TPM3-207ENST00000341372 PECRQ9BY49 303 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 BEX1Q9HBH7 125 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 TAF9BQ9HBM6 251 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 GAR1Q9NY12 217 aaKnown RBP8.2□□□□□ -1.1
TPM3-207ENST00000341372 PITPNC1Q9UKF7 332 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 CLPSL1A2RUU4 121 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 VEGFCP49767 419 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 ZNF137PP52743 207 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 IL18Q14116 193 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 TRIM16LQ309B1 348 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 OLFML2AQ68BL7 652 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 Q6ZRM9 215 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 SLC25A48Q6ZT89 311 aaKnown RBP8.2□□□□□ -1.1
TPM3-207ENST00000341372 LINC01006Q8NI28 216 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 UBALD1Q8TB05 177 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 GRAMD2BQ96HH9 432 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 ARHGAP5-AS1Q96IT6 56 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 Q9N2K0 584 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 RDH8Q9NYR8 311 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 AK3Q9UIJ7 227 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 JPT1Q9UK76 154 aa8.2□□□□□ -1.1
TPM3-207ENST00000341372 A0A1W2PPI3 338 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms