RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 KNCNA6PVL3 124 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 BIRC5O15392 142 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 ZSCAN12O43309 604 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF207O43670 478 aaKnown RBP7.44□□□□□ -1.22
ATXN3-201ENST00000340660 SERPINA3P01011 423 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 CPEP16870 476 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 RPL37AP61513 92 aaKnown RBP7.44□□□□□ -1.22
ATXN3-201ENST00000340660 ODF4Q2M2E3 257 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 PIGYQ3MUY2 71 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF705AQ6ZN79 300 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-201ENST00000340660 PLEKHG7Q6ZR37 379 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 Q6ZRU5 148 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 SAXO1Q8IYX7 474 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 SRSF12Q8WXF0 261 aaKnown RBP7.44□□□□□ -1.22
ATXN3-201ENST00000340660 MOB1AQ9H8S9 216 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 NEK6Q9HC98 313 aa7.44□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF705FA8MVS1 300 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-201ENST00000340660 AIPO00170 330 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 DFFBO76075 338 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-201ENST00000340660 OSMP13725 252 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 GPR183P32249 361 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 CD300CQ08708 224 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 IL13RA2Q14627 380 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 ESRGQ1W209 222 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 MICAQ29983 383 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 FAM90A2PQ658T7 463 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 GLT8D1Q68CQ7 371 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF679Q8IYX0 411 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 OR2A7Q96R45 310 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 OR51V1Q9H2C8 321 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 SLC35D1Q9NTN3 355 aa7.43□□□□□ -1.22
ATXN3-201ENST00000340660 MRPS16Q9Y3D3 137 aaKnown RBP7.43□□□□□ -1.22
ATXN3-201ENST00000340660 MFSD2BA6NFX1 497 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF254O75437 659 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 DIRAS1O95057 198 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 DBTP11182 482 aaKnown RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 ATF1P18846 271 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 PRKACBP22694 351 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 GNRHRP30968 328 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 NUDT2P50583 147 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 RIDAP52758 137 aaKnown RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 LIPEQ05469 1076 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 SF3A3Q12874 501 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 TSPAN31Q12999 210 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 SYT6Q5T7P8 510 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 DMKNQ6E0U4 476 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 ERICH5Q6P6B1 374 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 TEX45Q8NA69 505 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 DRAXINQ8NBI3 349 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 CHAC2Q8WUX2 184 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 OTULINQ96BN8 352 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 ADAT3Q96EY9 351 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 OPALINQ96PE5 141 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 PPCSQ9HAB8 311 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 NDUFAF4Q9P032 175 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 YTHDF2Q9Y5A9 579 aaKnown RBP7.42□□□□□ -1.22
ATXN3-201ENST00000340660 RFNGQ9Y644 331 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 R4GMQ9 66 aa7.42□□□□□ -1.22
ATXN3-201ENST00000340660 F5H768 121 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 SYT7O43581 403 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 GSTT2P0CG29 244 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 GSTT2BP0CG30 244 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 ALDH3B2P48448 385 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 GK3PQ14409 553 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 ELP2Q6IA86 826 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 NFE4Q86UQ8 179 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 IL20Q9NYY1 176 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 XCL2Q9UBD3 114 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 SMPXQ9UHP9 88 aa7.41□□□□□ -1.22
ATXN3-201ENST00000340660 CHEK1O14757 476 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 MAGEB4O15481 346 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-201ENST00000340660 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 RCC1P18754 421 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-201ENST00000340660 RPS7P62081 194 aaKnown RBP7.4□□□□□ -1.22
ATXN3-201ENST00000340660 TNXAQ16473 311 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 ZSCAN26Q16670 478 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 LRRTM1Q86UE6 522 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF383Q8NA42 475 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 OR4K15Q8NH41 348 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 PP6455Q8WZ26 134 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 C20orf24Q9BUV8 137 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 RHPN1-AS1Q9BWJ2 59 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 TSSK6Q9BXA6 273 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 JPT1Q9UK76 154 aa7.4□□□□□ -1.22
ATXN3-201ENST00000340660 IGHV3-49A0A0A0MS15 119 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 LRCOL1A6NCL2 159 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 SMIM9A6NGZ8 99 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 RIIAD1A6NNX1 92 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 PANO1I0J062 215 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 RAB29O14966 203 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 YPEL1O60688 119 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 IFNGP01579 166 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 TMEM225BP0DP42 221 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 SOX2P48431 317 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 C10orf55Q5SWW7 151 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 RPL13AP3Q6NVV1 102 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 PLET1Q6UQ28 207 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms