RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CATR1Q13166 79 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 OR2T10Q8NGZ9 312 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 TMEM147Q9BVK8 224 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 HEYLQ9NQ87 328 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-201ENST00000340437 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 LRRC30A6NM36 301 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 PKIAP61925 76 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 LEAP2Q969E1 77 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 TMEM30CPA0ZSE6 113 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 YKT6O15498 198 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 WISP2O76076 250 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
CPSF7-201ENST00000340437 QTRT1Q9BXR0 403 aaKnown RBP12.08□□□□□ -0.48
CPSF7-201ENST00000340437 CHD8Q9HCK8 2581 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 ARFGEF3Q5TH69 2177 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 SPINK4O60575 86 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 CDC34P49427 236 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 RND2P52198 227 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 GNB2P62879 340 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 CYP2G1PQ6ZSU1 146 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 TMEM183AQ8IXX5 376 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 TRIB1Q96RU8 372 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 P2RX4Q99571 388 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 PKIBQ9C010 78 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 SRD5A3Q9H8P0 318 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 C1QTNF9P0C862 333 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 ZNF705DP0CH99 300 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 ZNF705BP0CI00 300 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 COX5BP10606 129 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 HOXC12P31275 282 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 RNPS1Q15287 305 aaKnown RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 TCF23Q7RTU1 214 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 NPCDR1Q9BY65 106 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 TRBV24-1A0A075B6N3 115 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 LINC00473A8K010 186 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 SP1P08047 785 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 LINC00596Q86U02 117 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 DMRTC2Q8IXT2 367 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-201ENST00000340437 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 CTDSP1Q9GZU7 261 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 SPTBN4Q9H254 2564 aa12.07□□□□□ -0.48
CPSF7-201ENST00000340437 TRGV5A0A0B4J1U4 118 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 B4E171 279 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 KLRC4-KLRK1H3BQV0 150 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-201ENST00000340437 SMPD2O60906 423 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 TSPAN7P41732 249 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 SP5Q6BEB4 398 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-201ENST00000340437 Q6ZR03 302 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 OR13A1Q8NGR1 328 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 MISP3Q96FF7 219 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 OTOGLQ3ZCN5 2332 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 IGHV3OR15-7A0A075B7D8 119 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 GRIFINA4D1Z8 144 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 GZMBP10144 247 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 NRN1LQ496H8 165 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 PDLIM3Q53GG5 364 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-201ENST00000340437 TMEM14EPQ6UXP3 125 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 ZGRF1Q86YA3 2104 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 SPAARA0A1B0GVQ0 90 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 ZNF664Q8N3J9 261 aa12.06□□□□□ -0.48
CPSF7-201ENST00000340437 KLF14Q8TD94 323 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-201ENST00000340437 HRASP01112 189 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 TRAPPC1Q9Y5R8 145 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 SPRR3Q9UBC9 169 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
CPSF7-201ENST00000340437 MARCH11A6NNE9 402 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 M0R1X1 148 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 ACTL6BO94805 426 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 NUBP1P53384 320 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 SRSF6Q13247 344 aaKnown RBP12.05□□□□□ -0.48
CPSF7-201ENST00000340437 MIC13Q5XKP0 118 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 REC114Q7Z4M0 266 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 GTF3AQ92664 365 aaKnown RBP12.05□□□□□ -0.48
CPSF7-201ENST00000340437 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
CPSF7-201ENST00000340437 DVL1O14640 695 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 OR4A8P0C604 315 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 CD46P15529 392 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 NPPCP23582 126 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 G0S2P27469 103 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 GPR12P47775 334 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 OR4A16Q8NH70 328 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 IMMP2LQ96T52 175 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 TRBV6-6A0A0A6YYG2 114 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 A0A1W2PNU3 283 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-201ENST00000340437 LNP1A1A4G5 178 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 SSX2Q16385 188 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 RPL39P5Q59GN2 51 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms