RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CXCL1P09341 107 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 PRDX2P32119 198 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 SERF2P84101 59 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 FAM90A2PQ658T7 463 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 H2BFWTQ7Z2G1 175 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 Q8WTZ3 238 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 MBD3L1Q8WWY6 194 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 MAP1LC3BQ9GZQ8 125 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 FAM234AQ9H0X4 552 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 POLEQ07864 2286 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 PCNX1Q96RV3 2341 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 CEBPZOSA8MTT3 80 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 OR8U8P0C7N1 319 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
LITAF-201ENST00000339430 VHLLQ6RSH7 139 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 SLC16A13Q7RTY0 426 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 DTD1Q8TEA8 209 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 LURAP1Q96LR2 239 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 CISD1Q9NZ45 108 aaKnown RBP13.56□□□□□ -0.24
LITAF-201ENST00000339430 A8MXE2 369 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 IFNL4K9M1U5 179 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 CASP6P55212 293 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 ERVFRD-1P60508 538 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 ELOBQ15370 118 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
LITAF-201ENST00000339430 MALSU1Q96EH3 234 aa13.56□□□□□ -0.24
LITAF-201ENST00000339430 C15orf65H3BRN8 121 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 M0R1B8 84 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 SPINT2O43291 252 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 CLDN14O95500 239 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 VKORC1Q9BQB6 163 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 SLC25A15Q9Y619 301 aa13.55□□□□□ -0.24
LITAF-201ENST00000339430 IGKV1D-17A0A075B6S4 117 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 TGIF2-C20orf24A0A0A6YYL0 155 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 IFNA17P01571 189 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 FGF7P21781 194 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 MAS1LP35410 378 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 TFF3Q07654 80 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 NCR3LG1Q68D85 454 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 SLC35E3Q7Z769 313 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 CA5BP1Q8WTZ4 195 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 LHX4Q969G2 390 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 AGMATQ9BSE5 352 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 TOLLIPQ9H0E2 274 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 TMPRSS5Q9H3S3 457 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 A0A087WWC5 75 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 MARCH11A6NNE9 402 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 IGHV2-5P01817 119 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 FAM27E3Q08E93 113 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 SSX9Q7RTT3 188 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 ZNRF1Q8ND25 227 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 NANPQ8TBE9 248 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 RND1Q92730 232 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 PINX1Q96BK5 328 aaKnown RBP13.54□□□□□ -0.24
LITAF-201ENST00000339430 S100PBPQ96BU1 408 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 GNG12Q9UBI6 72 aa13.54□□□□□ -0.24
LITAF-201ENST00000339430 PMS2P5A8MQ11 134 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 RAB29O14966 203 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 ZNF737O75373 536 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 CA7P43166 264 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 GPR12P47775 334 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 ZNF674Q2M3X9 581 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 NCMAPQ5T1S8 102 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 MRGPRGQ86SM5 289 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 METTL1Q9UBP6 276 aaKnown RBP13.53□□□□□ -0.24
LITAF-201ENST00000339430 RELNP78509 3460 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 FCGR3BO75015 233 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 DEFA4P12838 97 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 OR10P1Q8NGE3 313 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 OR2V2Q96R30 315 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 HSD17B10Q99714 261 aaKnown RBP13.53□□□□□ -0.24
LITAF-201ENST00000339430 TMEM147Q9BVK8 224 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
LITAF-201ENST00000339430 PARD6GQ9BYG4 376 aaPredicted RBP13.53□□□□□ -0.24
LITAF-201ENST00000339430 VAX2Q9UIW0 290 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 IGSF10Q6WRI0 2623 aa13.53□□□□□ -0.24
LITAF-201ENST00000339430 SPRY3O43610 288 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 PROP1O75360 226 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 OR9G9P0C7N8 305 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 TUBG1P23258 451 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 EDDM3BP56851 147 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 FAM201AQ5SY85 155 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 ZNF66Q6ZN08 573 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 MOGAT3Q86VF5 341 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 GCSAMQ8N6F7 178 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 OR10G4Q8NGN3 311 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 R3HDM4Q96D70 268 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 TUBG2Q9NRH3 451 aa13.52□□□□□ -0.24
LITAF-201ENST00000339430 SRRM5B3KS81 715 aa13.52□□□□□ -0.25
LITAF-201ENST00000339430 AP4M1O00189 453 aa13.52□□□□□ -0.25
LITAF-201ENST00000339430 CYB5BO43169 146 aa13.52□□□□□ -0.25
LITAF-201ENST00000339430 KIAA0141Q14154 515 aaPredicted RBP13.52□□□□□ -0.25
LITAF-201ENST00000339430 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.25
LITAF-201ENST00000339430 DSCAMO60469 2012 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 CCL21O00585 134 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 ADH4P08319 380 aa13.51□□□□□ -0.25
LITAF-201ENST00000339430 SELLP14151 372 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms