RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SPP1P10451 314 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 PVALBP20472 110 aaPredicted RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 SULT1A2P50226 295 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 TNFRSF9Q07011 255 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF672Q499Z4 452 aaPredicted RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM182Q6ZP80 229 aaPredicted RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 Q6ZRG5 221 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF383Q8NA42 475 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 ZBTB34Q8NCN2 500 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF439Q8NDP4 499 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 SMIM8Q96KF7 97 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 DIRC2Q96SL1 478 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 QTRT1Q9BXR0 403 aaKnown RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 RNF212BA8MTL3 300 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 NDUFS7O75251 213 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 SLC25A6P12236 298 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 CATR1Q13166 79 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 OR8G2PQ6IF36 304 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 TRAT1Q6PIZ9 186 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 H2BFWTQ7Z2G1 175 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 HSD17B13Q7Z5P4 300 aaPredicted RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 CCDC28AQ8IWP9 274 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 LRRC20Q8TCA0 184 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 R3HDM4Q96D70 268 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 EAF1Q96JC9 268 aaPredicted RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 HSD17B10Q99714 261 aaKnown RBP6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 GINS3Q9BRX5 216 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 RSG1Q9BU20 258 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 ZFP57Q9NU63 452 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 IDI2-AS1Q9NZ38 188 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 LRRK2Q5S007 2527 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 SRRM4A7MD48 611 aaKnown RBP6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 TOR1AO14656 332 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 CRYZL1O95825 349 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 APOC3P02656 99 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 ADCYAP1P18509 176 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 MRPS11P82912 194 aaKnown RBP6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 EFNB3Q15768 340 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF66Q6ZN08 573 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 DDB2Q92466 427 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 NUPL2O15504 423 aaKnown RBP6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 DANCRP0C864 163 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 CCL20P78556 96 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF616Q08AN1 781 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 HFEQ30201 348 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 C1orf87Q8N0U7 546 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 C11orf42Q8N5U0 333 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 EIF4E3Q8N5X7 224 aaKnown RBP6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 OR2G3Q8NGZ4 309 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 IGFBPL1Q8WX77 278 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 OR4C12Q96R67 309 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 VSIRQ9H7M9 311 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 HSPB7Q9UBY9 170 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 RPUSD1Q9UJJ7 312 aaKnown RBP6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 FBXO7Q9Y3I1 522 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 LINC00312Q9Y6C7 94 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 WSB1Q9Y6I7 421 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 POLQO75417 2590 aa6.06□□□□□ -1.44
SRFBP1-201ENST00000339397 BORCS7-ASMTA0A0B4J1R7 106 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 hADV38S2A0JD32 116 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF729A6NN14 1252 aaPredicted RBP6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 SHOXO15266 292 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 PRH1P02810 166 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 OPN1MWP04001 364 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 CT45A6P0DMU7 189 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 CT45A5P0DMU8 189 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 CT45A7P0DMV0 189 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 OPN1MW2P0DN77 364 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 OPN1MW3P0DN78 364 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 ZP3P21754 424 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 SULT1A1P50225 295 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 BTNL8Q6UX41 500 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 SUN5Q8TC36 379 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 CORO2AQ92828 525 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 RAB40CQ96S21 281 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 S1PR3Q99500 378 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 SLC25A31Q9H0C2 315 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 CACFD1Q9UGQ2 172 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 LAMP3Q9UQV4 416 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 NKX6-3A6NJ46 265 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 RAB29O14966 203 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 NDUFB3O43676 98 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 PAX6P26367 422 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 RPL23AP62750 156 aaKnown RBP6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 SLC25A48Q6ZT89 311 aaKnown RBP6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 ITLN2Q8WWU7 325 aaPredicted RBP6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF714Q96N38 554 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM204Q9BSN7 226 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 LINC00574Q9H8X3 128 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 FBN2P35556 2912 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 DOPEY1Q5JWR5 2465 aa6.05□□□□□ -1.44
SRFBP1-201ENST00000339397 PRB1P04280 392 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 SEC11BP0C7V7 166 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 DEFA4P12838 97 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 GUCA2BQ16661 112 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 LRRC10Q5BKY1 277 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF841Q6ZN19 808 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 SSX8Q7RTT4 187 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms