RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 CD99P14209 185 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 CSF2RBP32927 897 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 TMEM189A5PLL7 270 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 PSG2P11465 335 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
FN1-202ENST00000336916 NRIP2Q9BQI9 281 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 HINT1P49773 126 aaPredicted RBP10.58□□□□□ -0.72
FN1-202ENST00000336916 C3AR1Q16581 482 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 SPINK9Q5DT21 86 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 DNAJC4Q9NNZ3 241 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 PATE3B3GLJ2 98 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 OR51G1Q8NGK1 321 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 ZPLD1Q8TCW7 415 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 GGACTQ9BVM4 153 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 CCL28Q9NRJ3 127 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 AUP1Q9Y679 476 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 CYB5R2Q6BCY4 276 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 EWSR1Q01844 656 aaKnown RBP eCLIP10.58□□□□□ -0.72
FN1-202ENST00000336916 PDCD1Q15116 288 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 GUCA2BQ16661 112 aa10.58□□□□□ -0.72
FN1-202ENST00000336916 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 KCNK17Q96T54 332 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 ZNF253O75346 499 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 CD160O95971 181 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 WDFY1Q8IWB7 410 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 LPAR5Q9H1C0 372 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 MAP1LC3AQ9H492 121 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 CALYQ9NYX4 217 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 HILPDAQ9Y5L2 63 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 UPK3AO75631 287 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 CMC4P56277 68 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 WDR25Q64LD2 544 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 NPIPB11E5RHQ5 1161 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 FABP4P15090 132 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 CKS2P33552 79 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 HERPUD1Q15011 391 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 ADAT3Q96EY9 351 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 PXMP4Q9Y6I8 212 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 OR2H2O95918 312 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 NPPCP23582 126 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 KLF14Q8TD94 323 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 RHOVQ96L33 236 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 ALKBH7Q9BT30 221 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 MOSPD3O75425 235 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
FN1-202ENST00000336916 OTPQ5XKR4 325 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 CLEC9AQ6UXN8 241 aa10.57□□□□□ -0.72
FN1-202ENST00000336916 SSBP3Q9BWW4 388 aaPredicted RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 HRKO00198 91 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 ZNF418Q8TF45 676 aaPredicted RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 PEMTQ9UBM1 199 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 RAXQ9Y2V3 346 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 TGFBR1P36897 503 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 LIMS1P48059 325 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 UNQ5815/PRO19632Q6UWF5 114 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 CSRP1P21291 193 aaKnown RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 RSPO4Q2I0M5 234 aaPredicted RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 BVESQ8NE79 360 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 ORAI1Q96D31 301 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 TMEM101Q96IK0 257 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 HSPB7Q9UBY9 170 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 A0A1W2PQM1 296 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 PTBP3O95758 552 aaKnown RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 IGHV3-13P01766 116 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 IGHV3-7P01780 117 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 C10orf128Q5T292 105 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 ITLN1Q8WWA0 313 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 SCMH1Q96GD3 660 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 ZNF385AQ96PM9 386 aaKnown RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 CCL13Q99616 98 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 HS3ST3B1Q9Y662 390 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 NKX2-6A6NCS4 301 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 LINC00869P0C866 280 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 CLEC12BQ2HXU8 276 aa10.56□□□□□ -0.72
FN1-202ENST00000336916 C8orf82Q6P1X6 216 aaPredicted RBP10.56□□□□□ -0.72
FN1-202ENST00000336916 VSIG8P0DPA2 414 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 UCP3P55916 312 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 IGKV3-7A0A075B6H7 116 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 CLDND2Q8NHS1 167 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 NPFFR1Q9GZQ6 430 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 BCL2P10415 239 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 OPN3Q9H1Y3 402 aaPredicted RBP10.55□□□□□ -0.72
FN1-202ENST00000336916 PCDH15Q96QU1 1955 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 LNP1A1A4G5 178 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 DTX1Q86Y01 620 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 NUDT3O95989 172 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 CD5P06127 495 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms