RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SLC25A40Q8TBP6 338 aa16.66■□□□□ 0.26
CDCA4-201ENST00000336219 MANBALQ9NQG1 85 aa16.66■□□□□ 0.26
CDCA4-201ENST00000336219 LRRC30A6NM36 301 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 C17orf98A8MV24 154 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 PSPNO60542 156 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 GRPP07492 148 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 C1QTNF9P0C862 333 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 RAC2P15153 192 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 NUTF2P61970 127 aaKnown RBP16.65■□□□□ 0.26
CDCA4-201ENST00000336219 FER1L6-AS2Q96M78 137 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 NEU1Q99519 415 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 SNHG12Q9BXW3 62 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 TRAV38-1A0A0B4J264 116 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 IQCF6A8MYZ5 107 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 SCGB1D1O95968 90 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 CNN1P51911 297 aaKnown RBP16.65■□□□□ 0.26
CDCA4-201ENST00000336219 GABRA6Q16445 453 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 TCF23Q7RTU1 214 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 GBGT1Q8N5D6 347 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 OR10P1Q8NGE3 313 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 DTD1Q8TEA8 209 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 TMEM204Q9BSN7 226 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 KCNIP1Q9NZI2 227 aa16.65■□□□□ 0.26
CDCA4-201ENST00000336219 RBMXL2O75526 392 aaKnown RBP16.64■□□□□ 0.25
CDCA4-201ENST00000336219 CD33P20138 364 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 COX5AP20674 150 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 G0S2P27469 103 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 OR3A1P47881 315 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 UBE2NP61088 152 aaKnown RBP16.64■□□□□ 0.25
CDCA4-201ENST00000336219 GNB1P62873 340 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 PSG7Q13046 419 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 MRPL37Q9BZE1 423 aaKnown RBP16.64■□□□□ 0.25
CDCA4-201ENST00000336219 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
CDCA4-201ENST00000336219 CACNA1DQ01668 2161 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 A0A0U1RQK1 487 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 TMEM30CPA0ZSE6 113 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 ZNF320A2RRD8 509 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 HNF1AP20823 631 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 CASP6P55212 293 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 LBHQ53QV2 105 aaPredicted RBP16.64■□□□□ 0.25
CDCA4-201ENST00000336219 LINC01551Q86U37 167 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 CISD2Q8N5K1 135 aaKnown RBP16.64■□□□□ 0.25
CDCA4-201ENST00000336219 ZBTB34Q8NCN2 500 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 BEND2Q8NDZ0 799 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 GALMQ96C23 342 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 HES4Q9HCC6 221 aa16.64■□□□□ 0.25
CDCA4-201ENST00000336219 C12orf77C9JDV5 145 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 P0C879 139 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 IGHV1-2P23083 117 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 COL8A2P25067 703 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 SRP14P37108 136 aaKnown RBP16.63■□□□□ 0.25
CDCA4-201ENST00000336219 ACOT6Q3I5F7 207 aaPredicted RBP16.63■□□□□ 0.25
CDCA4-201ENST00000336219 CST9LP1Q5W188 147 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 GMPPAQ96IJ6 420 aaPredicted RBP16.63■□□□□ 0.25
CDCA4-201ENST00000336219 TMEM210A6NLX4 147 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 CD59P13987 128 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 GCH1P30793 250 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 EIF4EBP1Q13541 118 aaPredicted RBP16.63■□□□□ 0.25
CDCA4-201ENST00000336219 FIP1L1Q6UN15 594 aaKnown RBP16.63■□□□□ 0.25
CDCA4-201ENST00000336219 TRAPPC1Q9Y5R8 145 aa16.63■□□□□ 0.25
CDCA4-201ENST00000336219 SOX15O60248 233 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 NDUFB4O95168 129 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 TYMSP04818 313 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 RPL15P61313 204 aaKnown RBP16.62■□□□□ 0.25
CDCA4-201ENST00000336219 TGFBR3Q03167 851 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 ZNF709Q8N972 641 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 POLR3KQ9Y2Y1 108 aaPredicted RBP16.62■□□□□ 0.25
CDCA4-201ENST00000336219 MLNRO43193 412 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 LYZL6O75951 148 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 MBP02144 154 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 CDC34P49427 236 aaPredicted RBP16.62■□□□□ 0.25
CDCA4-201ENST00000336219 MSMO1Q15800 293 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 KCNIP4Q6PIL6 250 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 CXorf67Q86X51 503 aaPredicted RBP16.62■□□□□ 0.25
CDCA4-201ENST00000336219 ZDHHC11Q9H8X9 412 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.62■□□□□ 0.25
CDCA4-201ENST00000336219 FKBP11Q9NYL4 201 aa16.62■□□□□ 0.25
CDCA4-201ENST00000336219 IQCJQ1A5X6 159 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 ATP1A1-AS1Q5TC04 95 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 WNT9BO14905 357 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 TNFSF15O95150 251 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 MPV17P39210 176 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 EDDM3BP56851 147 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 ATP6V1FQ16864 119 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 CYB5R2Q6BCY4 276 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 SLC35E4Q6ICL7 350 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 Q8N7P7 452 aa16.61■□□□□ 0.25
CDCA4-201ENST00000336219 PATZ1Q9HBE1 687 aaKnown RBP16.61■□□□□ 0.25
CDCA4-201ENST00000336219 IGHV3-43A0A0B4J1X8 118 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 GRIFINA4D1Z8 144 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 RBFOX2O43251 390 aaKnown RBP eCLIP16.6■□□□□ 0.256e-10■■■■□ 25.8
CDCA4-201ENST00000336219 HBZP02008 142 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 IGHV3-43DP0DP04 118 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 AESQ08117 197 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 ZNF826PQ6ZT77 177 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 TPRX1Q8N7U7 411 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 KLF14Q8TD94 323 aaPredicted RBP16.6■□□□□ 0.25
CDCA4-201ENST00000336219 OBP2BQ9NPH6 170 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 GPR179Q6PRD1 2367 aa16.6■□□□□ 0.25
CDCA4-201ENST00000336219 OOEPA6NGQ2 149 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms