RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 RCVRNP35243 200 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 FXYD4P59646 89 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 HERV-K104P61576 105 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 CX3CL1P78423 397 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 TMEM267Q0VDI3 215 aaPredicted RBP11.02□□□□□ -0.65
LIMS1-201ENST00000332345 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 KCTD9Q7L273 389 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 OSR1Q8TAX0 266 aaPredicted RBP11.02□□□□□ -0.65
LIMS1-201ENST00000332345 CLCC1Q96S66 551 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 PARP11Q9NR21 331 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 CCL28Q9NRJ3 127 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 RABL2AQ9UBK7 228 aaPredicted RBP11.02□□□□□ -0.65
LIMS1-201ENST00000332345 RABL2BQ9UNT1 228 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 FCN1O00602 326 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 SLC25A17O43808 307 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 FCGR3BO75015 233 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 CRYZL1O95825 349 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 IGHG4P01861 327 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 ELANEP08246 267 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 HRH1P35367 487 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 TSPAN5P62079 268 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 FOXE3Q13461 319 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 CXorf66Q5JRM2 361 aaPredicted RBP11.01□□□□□ -0.65
LIMS1-201ENST00000332345 PPP1R27Q86WC6 154 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 TEX45Q8NA69 505 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 TCTEX1D2Q8WW35 142 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 FCAMRQ8WWV6 532 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 ABHD1Q96SE0 405 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 ZNF2Q9BSG1 426 aaPredicted RBP11.01□□□□□ -0.65
LIMS1-201ENST00000332345 MIXL1Q9H2W2 232 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 WSB1Q9Y6I7 421 aa11.01□□□□□ -0.65
LIMS1-201ENST00000332345 CMYA5Q8N3K9 4069 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 NBEAL1Q6ZS30 2694 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 TRAV41A0A0B4J266 112 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 SRRM4A7MD48 611 aaKnown RBP11□□□□□ -0.65
LIMS1-201ENST00000332345 ATP6V0E1O15342 81 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 CNIH1O95406 144 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 IGLV2-23P01705 113 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 PF4V1P10720 104 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 SLC6A1P30531 599 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 KIR2DS2P43631 304 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
LIMS1-201ENST00000332345 VMA21Q3ZAQ7 101 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 ACTBL2Q562R1 376 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 LPCAT3Q6P1A2 487 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 TMEM65Q6PI78 240 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 TMEM17Q86X19 198 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 LAX1Q8IWV1 398 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 DIRAS2Q96HU8 199 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 C6orf62Q9GZU0 229 aaPredicted RBP11□□□□□ -0.65
LIMS1-201ENST00000332345 TAS2R8Q9NYW2 309 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 VWFP04275 2813 aa11□□□□□ -0.65
LIMS1-201ENST00000332345 G3V318 75 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 CA2P00918 260 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 IFNA6P05013 189 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 CRYGBP07316 175 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 PPIFP30405 207 aaKnown RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 GNRHRP30968 328 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 CRIP2P52943 208 aaPredicted RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 UBE2KP61086 200 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 RPL23AP62750 156 aaKnown RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 MRPS10P82664 201 aaKnown RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 CFHR3Q02985 330 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 EIF4EBP1Q13541 118 aaPredicted RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 FXYD3Q14802 87 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 OR52I2Q8NH67 350 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 OR4S2Q8NH73 311 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 MCFD2Q8NI22 146 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 MOB3AQ96BX8 217 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 AIFM2Q9BRQ8 373 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 SLIRPQ9GZT3 109 aaKnown RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 KLK11Q9UBX7 282 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 MTFP1Q9UDX5 166 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 RSL24D1Q9UHA3 163 aaKnown RBP10.99□□□□□ -0.65
LIMS1-201ENST00000332345 NUBP2Q9Y5Y2 271 aa10.99□□□□□ -0.65
LIMS1-201ENST00000332345 NUDT19A8MXV4 375 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 GABARAPH6UMI1 98 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 ZNF701M0R085 212 aaPredicted RBP10.98□□□□□ -0.65
LIMS1-201ENST00000332345 TNFSF12O43508 249 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 CD40LGP29965 261 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 CATR1Q13166 79 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 OR2B11Q5JQS5 317 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 PYHIN1Q6K0P9 492 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 ZNF818PQ6ZRF7 136 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 CMTM1Q8IZ96 169 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 MINDY2Q8NBR6 621 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 CD300LFQ8TDQ1 290 aa10.98□□□□□ -0.65
LIMS1-201ENST00000332345 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 HRASP01112 189 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 PF4P02776 101 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 RPLP1P05386 114 aaKnown RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 EGR2P11161 476 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 TBPP20226 339 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 PSMB8P28062 276 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms