RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PLGLAQ15195 96 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 SURF2Q15527 256 aaPredicted RBP13.25□□□□□ -0.29
PDGFB-201ENST00000331163 CLEC12BQ2HXU8 276 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 FAM89BQ8N5H3 189 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 TM2D1Q9BX74 207 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 SEBOXQ9HB31 216 aaPredicted RBP13.25□□□□□ -0.29
PDGFB-201ENST00000331163 Q9N2K0 584 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 IL19Q9UHD0 177 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 B9A039 149 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 JTBO76095 146 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 CD24P25063 80 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 LCN2P80188 198 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 NHLH2Q02577 135 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 SPNS3Q6ZMD2 512 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 POC1AQ8NBT0 407 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 AQP10Q96PS8 301 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 ZNF729A6NN14 1252 aaPredicted RBP13.25□□□□□ -0.29
PDGFB-201ENST00000331163 PHOX2AO14813 284 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 COX6B1P14854 86 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 HLA-GP17693 338 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 GPR6P46095 362 aaPredicted RBP13.25□□□□□ -0.29
PDGFB-201ENST00000331163 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
PDGFB-201ENST00000331163 CRIP3Q6Q6R5 217 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 C19orf12Q9NSK7 152 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 SHISA9B4DS77 424 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
PDGFB-201ENST00000331163 SSX2Q16385 188 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 ZNF672Q499Z4 452 aaPredicted RBP13.24□□□□□ -0.29
PDGFB-201ENST00000331163 ZNF818PQ6ZRF7 136 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 DMRTC2Q8IXT2 367 aaPredicted RBP13.24□□□□□ -0.29
PDGFB-201ENST00000331163 MRPL30Q8TCC3 161 aaKnown RBP13.24□□□□□ -0.29
PDGFB-201ENST00000331163 FAM157AC9JC47 383 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 DVL1O14640 695 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 RPL39P5Q59GN2 51 aa13.24□□□□□ -0.29
PDGFB-201ENST00000331163 ITLN2Q8WWU7 325 aaPredicted RBP13.24□□□□□ -0.29
PDGFB-201ENST00000331163 RTBDNQ9BSG5 229 aaPredicted RBP13.24□□□□□ -0.29
PDGFB-201ENST00000331163 SMCO3A2RU48 225 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 TMEM8BA6NDV4 472 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 ZNF705GA8MUZ8 300 aaPredicted RBP13.23□□□□□ -0.29
PDGFB-201ENST00000331163 TUBG1P23258 451 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 GGNBP1Q5YKI7 109 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 ZNF525Q8N782 197 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 RAB1CQ92928 201 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 ABHD14AQ9BUJ0 271 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 PARP11Q9NR21 331 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 HILPDAQ9Y5L2 63 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 PPP1R2P9O14990 202 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 CLDN1O95832 211 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 PCSK4Q6UW60 755 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 DYSFO75923 2080 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 DBX1A6NMT0 343 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 FOLR2P14207 255 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 G0S2P27469 103 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 SNCAP37840 140 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 RHEBQ15382 184 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 FAHD2BQ6P2I3 314 aaPredicted RBP13.23□□□□□ -0.29
PDGFB-201ENST00000331163 STX12Q86Y82 276 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 FAHD2AQ96GK7 314 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 PBDC1Q9BVG4 233 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
PDGFB-201ENST00000331163 TGIF2-C20orf24A0A0A6YYL0 155 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 TRGC2P03986 189 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 FPR2P25090 351 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 AKR1C8PQ5T2L2 129 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 HIVEP2P31629 2446 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 A0A087X0M5 115 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 A0A1B0GX30 115 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 MGST3O14880 152 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 C11orf53Q8IXP5 236 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 SSSCA1O60232 199 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 IGHV2-5P01817 119 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 GNB1P62873 340 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 IL13RA2Q14627 380 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 LYPD6Q86Y78 171 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 HSF4Q9ULV5 492 aa13.22□□□□□ -0.29
PDGFB-201ENST00000331163 C3orf85A0A1B0GTC6 90 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 BTBD17A6NE02 478 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 SRRM5B3KS81 715 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 J3QW42 95 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 SIAH2O43255 324 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 CST7O76096 145 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 MOB3BQ86TA1 216 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 COQ2Q96H96 371 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 RIMS4Q9H426 269 aaPredicted RBP13.21□□□□□ -0.29
PDGFB-201ENST00000331163 OR2W1Q9Y3N9 320 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 TRBV6-7A0A0A0MS04 114 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 CEBPZOSA8MTT3 80 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 DTYMKP23919 212 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 CCL20P78556 96 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 LURAP1Q96LR2 239 aa13.21□□□□□ -0.29
PDGFB-201ENST00000331163 hADV38S2A0JD32 116 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 TAAR5O14804 337 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.3
PDGFB-201ENST00000331163 G6PCP35575 357 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 LGALS4P56470 323 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 HMGN3Q15651 99 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 OR8G2PQ6IF36 304 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 CCL19Q99731 98 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms