RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 IGLV1-51P01701 117 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 IGHV4-30-4P0DP06 118 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 TAGLNQ01995 201 aaKnown RBP9.44□□□□□ -0.9
TPM3-204ENST00000323144 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 OR2B11Q5JQS5 317 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 H1FOOQ8IZA3 346 aaPredicted RBP9.44□□□□□ -0.9
TPM3-204ENST00000323144 MUC7Q8TAX7 377 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 OR4C12Q96R67 309 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 GINS4Q9BRT9 223 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 GAR1Q9NY12 217 aaKnown RBP9.44□□□□□ -0.9
TPM3-204ENST00000323144 COA4Q9NYJ1 87 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 STUB1Q9UNE7 303 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 SACSQ9NZJ4 4579 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 TRAV1-2A0A0B4J238 106 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 PDCD5O14737 125 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 PRH1P02810 166 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
TPM3-204ENST00000323144 RAB3BP20337 219 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 RAB6AP20340 208 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 GADD45AP24522 165 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 DUTP33316 252 aaKnown RBP9.43□□□□□ -0.9
TPM3-204ENST00000323144 SYNJ2BPP57105 145 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 ARFRP1Q13795 201 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 TNXAQ16473 311 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 RTL8BQ17RB0 113 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 NUDCD2Q8WVJ2 157 aa9.43□□□□□ -0.9
TPM3-204ENST00000323144 TINAGL1Q9GZM7 467 aaPredicted RBP9.43□□□□□ -0.9
TPM3-204ENST00000323144 C3orf84H3BNL1 204 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 J3QRK9 145 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 DIRAS3O95661 229 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 ZP3P21754 424 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 CD40LGP29965 261 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 ZNF45Q02386 682 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 CBX3Q13185 183 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 EXOSC2Q13868 293 aaKnown RBP9.42□□□□□ -0.9
TPM3-204ENST00000323144 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 IL34Q6ZMJ4 242 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 Q8N1Y9 231 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 ADAD2Q8NCV1 583 aaKnown RBP9.42□□□□□ -0.9
TPM3-204ENST00000323144 OR9G4Q8NGQ1 327 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 LGALS14Q8TCE9 139 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
TPM3-204ENST00000323144 ACOT12Q8WYK0 555 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 PHB2Q99623 299 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 ATG5Q9H1Y0 275 aa9.42□□□□□ -0.9
TPM3-204ENST00000323144 RBM7Q9Y580 266 aaKnown RBP9.42□□□□□ -0.9
TPM3-204ENST00000323144 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 IGKV1D-13A0A0B4J2D9 117 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 TRDV1A0A1B0GX56 115 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 TMEM235A6NFC5 223 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 IGKV1-13P0DP09 117 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 EDN2P20800 178 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 HSPA13P48723 471 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 GABARAPL2P60520 117 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 UBE2KP61086 200 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
TPM3-204ENST00000323144 PRSS8Q16651 343 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 VMA21Q3ZAQ7 101 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 ZNF343Q6P1L6 599 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 Q6ZS49 121 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 KCTD9Q7L273 389 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 ANKRD13BQ86YJ7 626 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 ELOVL1Q9BW60 279 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 ZNF430Q9H8G1 570 aaPredicted RBP9.41□□□□□ -0.9
TPM3-204ENST00000323144 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
TPM3-204ENST00000323144 BLOC1S6Q9UL45 172 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 TNCP24821 2201 aa9.41□□□□□ -0.9
TPM3-204ENST00000323144 ERICH4A6NGS2 130 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 BMPR1BO00238 502 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 SSX5O60225 188 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 OR9G9P0C7N8 305 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 NFYAP23511 347 aaPredicted RBP9.4□□□□□ -0.9
TPM3-204ENST00000323144 DTYMKP23919 212 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 PSMB9P28065 219 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 LGALS7P47929 136 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 PSMD7P51665 324 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 KLF5Q13887 457 aaPredicted RBP9.4□□□□□ -0.9
TPM3-204ENST00000323144 ZFAND6Q6FIF0 208 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 VKORC1L1Q8N0U8 176 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 ZNF645Q8N7E2 425 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 GPHA2Q96T91 129 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 THAP7Q9BT49 309 aaPredicted RBP9.4□□□□□ -0.9
TPM3-204ENST00000323144 VCX3BQ9H321 246 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 RETNQ9HD89 108 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 AKIP1Q9NQ31 210 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 C19orf73Q9NVV2 129 aa9.4□□□□□ -0.9
TPM3-204ENST00000323144 LYSTQ99698 3801 aa9.4□□□□□ -0.91
TPM3-204ENST00000323144 A0A0G2JLM5 398 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 MSGN1A6NI15 193 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 MPPED1O15442 326 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 FCGR3BO75015 233 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 CSN3P07498 182 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 TALDO1P37837 337 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 RHOGP84095 191 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 CDK10Q15131 360 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 UBE2UQ5VVX9 321 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms