RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 C17orf58Q2M2W7 97 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 RBMS3Q6XE24 437 aaKnown RBP12.21□□□□□ -0.45
CLK4-201ENST00000316308 MUCL1Q96DR8 90 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 CCL13Q99616 98 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 KLF2Q9Y5W3 355 aaPredicted RBP12.21□□□□□ -0.45
CLK4-201ENST00000316308 SPTBN4Q9H254 2564 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 CEBPZOSA8MTT3 80 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 IGHV1-46P01743 117 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 CXCL1P09341 107 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 RAB5AP20339 215 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 PTAFRP25105 342 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.46
CLK4-201ENST00000316308 ZBTB34Q8NCN2 500 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 YPEL4Q96NS1 127 aa12.21□□□□□ -0.46
CLK4-201ENST00000316308 ABCA4P78363 2273 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 IGLV3-9A0A075B6K5 115 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 A0A0G2JNJ9 132 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 OR2C1O95371 312 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 GYPAP02724 150 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
CLK4-201ENST00000316308 SSX3Q99909 188 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 Q9UFV3 132 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 TP53TG5Q9Y2B4 290 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 MGST3O14880 152 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 MT-ND4LP03901 98 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
CLK4-201ENST00000316308 HTD2P86397 168 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 CT45A1Q5HYN5 189 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 DOLPP1Q86YN1 238 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 CT45A3Q8NHU0 189 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 CA5BP1Q8WTZ4 195 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 SNX22Q96L94 193 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
CLK4-201ENST00000316308 TANC2Q9HCD6 1990 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 C15orf62A8K5M9 175 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 FCN3O75636 299 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 HSPB1P04792 205 aaKnown RBP12.19□□□□□ -0.46
CLK4-201ENST00000316308 FGF7P21781 194 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 CD40P25942 277 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
CLK4-201ENST00000316308 GNG10P50151 68 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 CALYQ9NYX4 217 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 BTBD17A6NE02 478 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 FAM90A26D6RGX4 464 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 RRHO14718 337 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 RAB29O14966 203 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 BCL2P10415 239 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 AGAP20933 346 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 TIMP3P35625 211 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 RHEBQ15382 184 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 MSMO1Q15800 293 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 TMEM41BQ5BJD5 291 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 Q8N7P7 452 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 FAM169BQ8N8A8 192 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 Q8NA96 180 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 Q8WTZ3 238 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 TMEM170AQ8WVE7 144 aa12.19□□□□□ -0.46
CLK4-201ENST00000316308 PSMG3Q9BT73 122 aaPredicted RBP12.19□□□□□ -0.46
CLK4-201ENST00000316308 PLXNB1O43157 2135 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 IFNA17P01571 189 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 ADH4P08319 380 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 CGB3P0DN86 165 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 CGB7P0DN87 165 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 FOLR2P14207 255 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 WFDC8Q8IUA0 241 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 FAM57AQ8TBR7 257 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 MBD3L1Q8WWY6 194 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
CLK4-201ENST00000316308 BIN3Q9NQY0 253 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 TRAV1-1A0A0B4J248 108 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 GZMHP20718 246 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 TUBG1P23258 451 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 PAX6P26367 422 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 TNFAIP6P98066 277 aaPredicted RBP12.18□□□□□ -0.46
CLK4-201ENST00000316308 KHDC3LQ587J8 217 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 ZNF66Q6ZN08 573 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 LHX4Q969G2 390 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 TUBG2Q9NRH3 451 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 OR6C3Q9NZP0 311 aa12.18□□□□□ -0.46
CLK4-201ENST00000316308 SAA2-SAA4A0A096LPE2 208 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 SAA2P0DJI9 122 aaPredicted RBP12.17□□□□□ -0.46
CLK4-201ENST00000316308 ASCL5Q7RTU5 278 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 NPCDR1Q9BY65 106 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 C1orf196B1AJZ1 125 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 OPN1MWP04001 364 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 OPN1MW2P0DN77 364 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 OPN1MW3P0DN78 364 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 CFHR2P36980 270 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 CD81P60033 236 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 ELOBQ15370 118 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
CLK4-201ENST00000316308 PRAMEF5Q5TYX0 476 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 OR10P1Q8NGE3 313 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 GAFA1Q96PS6 74 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 HIPK2Q9H2X6 1198 aa12.17□□□□□ -0.46
CLK4-201ENST00000316308 COL12A1Q99715 3063 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms