RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TNCP24821 2201 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 NOTCH3Q9UM47 2321 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 SMIM31A0A1B0GVY4 71 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 SULT1C2O00338 296 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 PRB2P02812 416 aaPredicted RBP9.43□□□□□ -0.9
SCFD1-201ENST00000311943 CRYGBP07316 175 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 NAT1P18440 290 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 PI3P19957 117 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 CFHR3Q02985 330 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 MZT2AQ6P582 158 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 KCTD9Q7L273 389 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 HARBI1Q96MB7 349 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 SLC5A7Q9GZV3 580 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 FXYD6Q9H0Q3 95 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 OR51J1Q9H342 316 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 E7EUB6 86 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 TMEM127O75204 238 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 CD3DP04234 171 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 CTXN2P0C2S0 81 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 PPIFP30405 207 aaKnown RBP9.42□□□□□ -0.9
SCFD1-201ENST00000311943 TNFSF8P32971 234 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 MC5RP33032 325 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 MFSD4AQ8N468 514 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 LFNGQ8NES3 379 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 OR51H1Q8NH63 302 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 TCTEX1D2Q8WW35 142 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 AP3S1Q92572 193 aa9.42□□□□□ -0.9
SCFD1-201ENST00000311943 ALX4Q9H161 411 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-201ENST00000311943 DPPA5A6NC42 116 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 G3V4G9 280 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 M0QZ24 198 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 SHOXO15266 292 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 DIRAS3O95661 229 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 HLA-DRB1P01911 266 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 OPN1MWP04001 364 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 OPN1MW2P0DN77 364 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 OPN1MW3P0DN78 364 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 OXLD1Q5BKU9 147 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 PDPNQ86YL7 162 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 FOXRED2Q8IWF2 684 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-201ENST00000311943 OR5H2Q8NGV7 314 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 GRPEL2Q8TAA5 225 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 GIMAP1Q8WWP7 306 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 DIRAS2Q96HU8 199 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 MS4A10Q96PG2 267 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 KIAA1456Q9P272 454 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 TRAV3A0A0B4J244 114 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 A0A1W2PN81 502 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 AP4M1O00189 453 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 RBMXL2O75526 392 aaKnown RBP9.41□□□□□ -0.9
SCFD1-201ENST00000311943 APOA2P02652 100 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 CHRNA7P36544 502 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 THBS3P49746 956 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 PHLDA2Q53GA4 152 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 DHRS11Q6UWP2 260 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 ETV3LQ6ZN32 361 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 OR8H1Q8NGG4 311 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 MCFD2Q8NI22 146 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 ABHD5Q8WTS1 349 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 MRGPRFQ96AM1 343 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 CMTM3Q96MX0 182 aa9.41□□□□□ -0.9
SCFD1-201ENST00000311943 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
SCFD1-201ENST00000311943 RLN1P04808 185 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 IGF1P05019 195 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 SAA1P0DJI8 122 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-201ENST00000311943 CBX5P45973 191 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 IL18Q14116 193 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 KIAA0141Q14154 515 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-201ENST00000311943 TMEM177Q53S58 311 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 AADACL3Q5VUY0 350 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 CHPT1Q8WUD6 406 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
SCFD1-201ENST00000311943 RSL24D1Q9UHA3 163 aaKnown RBP9.4□□□□□ -0.9
SCFD1-201ENST00000311943 A0A1B0GW64 132 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 KCNAB3O43448 404 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 PRH1P02810 166 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 FXYD3Q14802 87 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 C2orf68Q2NKX9 166 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 OR5T1Q8NG75 326 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 GNB4Q9HAV0 340 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 ADAM30Q9UKF2 790 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 TRAV41A0A0B4J266 112 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 KLHL30-AS1Q8NEE0 82 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 MOB3AQ96BX8 217 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 NXF2Q9GZY0 626 aaKnown RBP9.39□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF430Q9H8G1 570 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-201ENST00000311943 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
SCFD1-201ENST00000311943 HMX3A6NHT5 357 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
SCFD1-201ENST00000311943 PGLYRP1O75594 196 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-201ENST00000311943 PF4V1P10720 104 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms