RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PARLQ9H300 379 aa21.1■□□□□ 0.97
HOXB3-201ENST00000311626 CNOT1A5YKK6 2376 aaKnown RBP21.09■□□□□ 0.97
HOXB3-201ENST00000311626 CRYAAP02489 173 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 RPL23P62829 140 aaKnown RBP21.09■□□□□ 0.97
HOXB3-201ENST00000311626 LEAP2Q969E1 77 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 PARD6GQ9BYG4 376 aaPredicted RBP21.09■□□□□ 0.97
HOXB3-201ENST00000311626 NAT8Q9UHE5 227 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 GCH1P30793 250 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 RPL39P5Q59GN2 51 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 AGMATQ9BSE5 352 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 CACNA1HO95180 2353 aa21.09■□□□□ 0.97
HOXB3-201ENST00000311626 TRAV38-1A0A0B4J264 116 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 CTXND1A0A1B0GTU2 59 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 SMCO3A2RU48 225 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 RAB29O14966 203 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 GZMHP20718 246 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 UBE2G2P60604 165 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 R3HDM4Q96D70 268 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 PRDX2P32119 198 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 GUSBP1Q15486 140 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 TIMM9Q9Y5J7 89 aa21.08■□□□□ 0.97
HOXB3-201ENST00000311626 IGHV1-18A0A0C4DH31 117 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 EDDM3BP56851 147 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 SMIM21Q3B7S5 101 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 BSXQ3C1V8 233 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 ZNF709Q8N972 641 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 GNG12Q9UBI6 72 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 LAMP3Q9UQV4 416 aa21.08■□□□□ 0.96
HOXB3-201ENST00000311626 HCFC1P51610 2035 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 RP1L1Q8IWN7 2480 aaPredicted RBP21.07■□□□□ 0.96
HOXB3-201ENST00000311626 IGHV2OR16-5A0A0B4J2B6 119 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 C15orf62A8K5M9 175 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 SEC14L6B5MCN3 397 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 C15orf65H3BRN8 121 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 KBTBD11O94819 623 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 ZNF718Q3SXZ3 478 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 FAM201AQ5SY85 155 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 TRAV3A0A0B4J244 114 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 IGHG3P01860 377 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 CENPVQ7Z7K6 275 aaPredicted RBP21.07■□□□□ 0.96
HOXB3-201ENST00000311626 ZNRF1Q8ND25 227 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 OR51G1Q8NGK1 321 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 TAAR6Q96RI8 345 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 ACTR3CQ9C0K3 210 aaPredicted RBP21.07■□□□□ 0.96
HOXB3-201ENST00000311626 TMEM242Q9NWH2 141 aa21.07■□□□□ 0.96
HOXB3-201ENST00000311626 SPAARA0A1B0GVQ0 90 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 PHOX2AO14813 284 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 GPR12P47775 334 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 VHLLQ6RSH7 139 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 OR4X1Q8NH49 305 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 Q8TCH9 128 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 COX5AP20674 150 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 ACSF3Q4G176 576 aaPredicted RBP21.06■□□□□ 0.96
HOXB3-201ENST00000311626 CYP2G1PQ6ZSU1 146 aa21.06■□□□□ 0.96
HOXB3-201ENST00000311626 PATZ1Q9HBE1 687 aaKnown RBP21.06■□□□□ 0.96
HOXB3-201ENST00000311626 M0R1X1 148 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 SPINT2O43291 252 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 SOX15O60248 233 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 OPN1MWP04001 364 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 OPN1MW2P0DN77 364 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 OPN1MW3P0DN78 364 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 SELLP14151 372 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 NPPCP23582 126 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 ATP6V1FQ16864 119 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 SDSLQ96GA7 329 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 TMEM204Q9BSN7 226 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 IGKV1D-17A0A075B6S4 117 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 ZNF134P52741 427 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 PRR7Q8TB68 274 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 PCGF1Q9BSM1 259 aa21.05■□□□□ 0.96
HOXB3-201ENST00000311626 PTPRBP23467 1997 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 ZNF83P51522 516 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 OR13D1Q8NGV5 346 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 LURAP1Q96LR2 239 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 OR6C3Q9NZP0 311 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 LY86O95711 162 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 PFN1P07737 140 aaKnown RBP21.04■□□□□ 0.96
HOXB3-201ENST00000311626 KITLGP21583 273 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 DUTP33316 252 aaKnown RBP21.04■□□□□ 0.96
HOXB3-201ENST00000311626 C1orf229Q6ZS94 237 aaPredicted RBP21.04■□□□□ 0.96
HOXB3-201ENST00000311626 OR10A7Q8NGE5 316 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 LOXL4Q96JB6 756 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 MEGF10Q96KG7 1140 aa21.04■□□□□ 0.96
HOXB3-201ENST00000311626 MGAQ8IWI9 3026 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 TRBV24-1A0A075B6N3 115 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 IFNA10P01566 189 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 GALR1P47211 349 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 DEFB124Q8NES8 71 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 HSD17B10Q99714 261 aaKnown RBP21.03■□□□□ 0.96
HOXB3-201ENST00000311626 A0A1W2PPQ1 181 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 RRHO14718 337 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 PRSS8Q16651 343 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 PRAMEF5Q5TYX0 476 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 Q8N7P7 452 aa21.03■□□□□ 0.96
HOXB3-201ENST00000311626 MRPL37Q9BZE1 423 aaKnown RBP21.03■□□□□ 0.96
HOXB3-201ENST00000311626 H7BYZ3 331 aa21.02■□□□□ 0.96
HOXB3-201ENST00000311626 SLC31A2O15432 143 aa21.02■□□□□ 0.96
HOXB3-201ENST00000311626 GYPAP02724 150 aa21.02■□□□□ 0.96
HOXB3-201ENST00000311626 ZNF66Q6ZN08 573 aa21.02■□□□□ 0.96
HOXB3-201ENST00000311626 ABHD12Q8N2K0 398 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms