RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 IGHV3-11P01762 117 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 CTXN2P0C2S0 81 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 ZP3P21754 424 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 LINC00205P59089 165 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 VMA21Q3ZAQ7 101 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 YTHDF1Q9BYJ9 559 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 ZNF230Q9UIE0 474 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC1-201ENST00000303731 KMT2CQ8NEZ4 4911 aaKnown RBP12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 SLC22A5O76082 557 aa12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 CRYGBP07316 175 aa12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 AADACP22760 399 aa12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 BVESQ8NE79 360 aa12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 OSR1Q8TAX0 266 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 STUB1Q9UNE7 303 aa12.84□□□□□ -0.35
TRAPPC1-201ENST00000303731 PSMB9P28065 219 aa12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 DUTP33316 252 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 UBE2KP61086 200 aa12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 HACD4Q5VWC8 232 aa12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 MAFIPQ8WZ33 124 aa12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 DDB2Q92466 427 aa12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 TXNL4BQ9NX01 149 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-201ENST00000303731 GP9P14770 177 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 SPNP16150 400 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 SCAND1P57086 179 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 SSBP2P81877 361 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 CDNFQ49AH0 187 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 SPARTQ8N0X7 666 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 ZNF645Q8N7E2 425 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 OR5T1Q8NG75 326 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 USMG5Q96IX5 58 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 TINAGL1Q9GZM7 467 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 SSR3Q9UNL2 185 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 TNCP24821 2201 aa12.82□□□□□ -0.36
TRAPPC1-201ENST00000303731 A0A0B4J203 849 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 ATP6V1G2O95670 118 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 CRYZL1O95825 349 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 CD36P16671 472 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 PJVKQ0ZLH3 352 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 C5orf30Q96GV9 206 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 PHB2Q99623 299 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 MRPS7Q9Y2R9 242 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 PRELID3BQ9Y3B1 194 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
TRAPPC1-201ENST00000303731 SRRM4A7MD48 611 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 ACTL6BO94805 426 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 PRSS8Q16651 343 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 SFXN4Q6P4A7 337 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 CNIH2Q6PI25 160 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 ANKRD13BQ86YJ7 626 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
TRAPPC1-201ENST00000303731 IGKV1D-8A0A087WSZ0 117 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 LINC00473A8K010 186 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 HLA-DQB1P01920 261 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 SNRPBP14678 240 aaKnown RBP12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 GNG2P59768 71 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 TNXAQ16473 311 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 TATDN3Q17R31 274 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 OVCH2Q7RTZ1 564 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 SPIN2AQ99865 258 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 ASCL2Q99929 193 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 SPIN2BQ9BPZ2 258 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 COA4Q9NYJ1 87 aa12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 PEF1Q9UBV8 284 aaKnown RBP12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 RRP15Q9Y3B9 282 aaKnown RBP12.79□□□□□ -0.36
TRAPPC1-201ENST00000303731 MSGN1A6NI15 193 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 C3orf84H3BNL1 204 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 MPPED1O15442 326 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 CDK10Q15131 360 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 FAM209BQ5JX69 171 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 ZNF343Q6P1L6 599 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 KCTD9Q7L273 389 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 MMD2Q8IY49 270 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 VSTM2AQ8TAG5 236 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 HSD17B10Q99714 261 aaKnown RBP12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 RSRP1Q9BUV0 290 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 ELF5Q9UKW6 265 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 ETV7Q9Y603 341 aa12.78□□□□□ -0.36
TRAPPC1-201ENST00000303731 A0A0A6YYH2 397 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 TMEM235A6NFC5 223 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 A6NJ64 397 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 H0Y980 276 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 FCGR3BO75015 233 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 TMEM127O75204 238 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 MRGPRG-AS1Q2M3A8 158 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 ZNF773Q6PK81 442 aa12.77□□□□□ -0.37
TRAPPC1-201ENST00000303731 SLC25A42Q86VD7 318 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms