RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
CASC4-201ENST00000299957 ARL2-SNX15V9GYD0 113 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 TRGV10A0A0A0MS01 117 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 MARCH11A6NNE9 402 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 APOA2P02652 100 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 ELOBQ15370 118 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 KCNMB1Q16558 191 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
CASC4-201ENST00000299957 CHRNA10Q9GZZ6 450 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.6
CASC4-201ENST00000299957 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.6
CASC4-201ENST00000299957 SOD3P08294 240 aa11.27□□□□□ -0.6
CASC4-201ENST00000299957 CRYGSP22914 178 aa11.27□□□□□ -0.6
CASC4-201ENST00000299957 C17orf82Q86X59 251 aaPredicted RBP11.27□□□□□ -0.6
CASC4-201ENST00000299957 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.6
CASC4-201ENST00000299957 MISP3Q96FF7 219 aa11.27□□□□□ -0.6
CASC4-201ENST00000299957 ZNF71Q9NQZ8 489 aaPredicted RBP11.27□□□□□ -0.6
CASC4-201ENST00000299957 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.6
CASC4-201ENST00000299957 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.6
CASC4-201ENST00000299957 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 AP1S3Q96PC3 154 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 IL36GQ9NZH8 169 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 WDFY4Q6ZS81 3184 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.61
CASC4-201ENST00000299957 OOEPA6NGQ2 149 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 P2RY6Q15077 328 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 DNM1P46Q6ZS02 220 aa11.27□□□□□ -0.61
CASC4-201ENST00000299957 COX7A2P2O60397 106 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 PRDX2P32119 198 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 SERF2P84101 59 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 OR1P1Q8NH06 330 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 FAM122AQ96E09 287 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 CCL13Q99616 98 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 IGF2RP11717 2491 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 NAPSAO96009 420 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 ABLIM2Q6H8Q1 611 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 OR8I2Q8N0Y5 310 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 ZCCHC24Q8N2G6 241 aaKnown RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 ST6GALNAC3Q8NDV1 305 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 PRDM14Q9GZV8 571 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 TICRRQ7Z2Z1 1910 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 RRHO14718 337 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 UCP3P55916 312 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 STARD6P59095 220 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 MZT1Q08AG7 82 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 OR5P3Q8WZ94 311 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 RALYQ9UKM9 306 aaKnown RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 DNPH1O43598 174 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 HOXA5P20719 270 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 OTX1P32242 354 aaPredicted RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 CNN1P51911 297 aaKnown RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 ZNF137PP52743 207 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 PKIAP61925 76 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
CASC4-201ENST00000299957 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 HEPN1Q6WQI6 88 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 TGIF2LXQ8IUE1 241 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 ZADH2Q8N4Q0 377 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 NCOR2Q9Y618 2525 aa11.26□□□□□ -0.61
CASC4-201ENST00000299957 C2CD3Q4AC94 2353 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 FAM157AC9JC47 383 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 NPY1RP25929 384 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 PAX6P26367 422 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 MPV17P39210 176 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 TPPP2P59282 170 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 PSG7Q13046 419 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 LINC00469Q8N7U9 141 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
CASC4-201ENST00000299957 B4DEV8 164 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 COX7A1P24310 79 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 MPZP25189 248 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 HOXA6P31267 233 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 ID3Q02535 119 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 PAX5Q02548 391 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 HERPUD1Q15011 391 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 OR1L6Q8NGR2 347 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 OR4X1Q8NH49 305 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 WNK1Q9H4A3 2382 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms