RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ATP6V1FQ16864 119 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 PRR27Q6MZM9 219 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 CXorf67Q86X51 503 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-201ENST00000297423 ZNF738Q8NE65 137 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 SYNGR4O95473 234 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 GRPP07492 148 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 ACP1P24666 158 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 RAB35Q15286 201 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 ODF3L1Q8IXM7 274 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 ZFP30Q9Y2G7 519 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 FOXI3A8MTJ6 420 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-201ENST00000297423 RSPO1Q2MKA7 263 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-201ENST00000297423 OR2M3Q8NG83 312 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM250H0YL14 139 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 CTXN2P0C2S0 81 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 RNASEKQ6P5S7 137 aaKnown RBP12.59□□□□□ -0.39
SPIDR-201ENST00000297423 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 FGFBP3Q8TAT2 258 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-201ENST00000297423 RPH3ALQ9UNE2 315 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 ATP23Q9Y6H3 246 aa12.59□□□□□ -0.39
SPIDR-201ENST00000297423 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 SOX8P57073 446 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 SPACA9Q96E40 222 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-201ENST00000297423 RASL10BQ96S79 203 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 TMEM147Q9BVK8 224 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 SLC35D1Q9NTN3 355 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 CAMPP49913 170 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 LINC00205P59089 165 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 RELBQ01201 579 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 MAJINQ3KP22 176 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 WDR54Q9H977 334 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 UQCR10Q9UDW1 63 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 C6orf15Q6UXA7 325 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-201ENST00000297423 OR2D2Q9H210 308 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
SPIDR-201ENST00000297423 PRR14LQ5THK1 2151 aa12.58□□□□□ -0.4
SPIDR-201ENST00000297423 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 A0A0J9YW62 118 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 SRIP30626 198 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 SUMO3P55854 103 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-201ENST00000297423 GNB1P62873 340 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 LINC01551Q86U37 167 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 TPRX1Q8N7U7 411 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 KCNIP1Q9NZI2 227 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 CCL25O15444 150 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 APOA2P02652 100 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 OR5P3Q8WZ94 311 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 NRN1Q9NPD7 142 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 TECRQ9NZ01 308 aaKnown RBP12.57□□□□□ -0.4
SPIDR-201ENST00000297423 MRPS18CQ9Y3D5 142 aaKnown RBP12.57□□□□□ -0.4
SPIDR-201ENST00000297423 RNF115Q9Y4L5 304 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 ANKRD30BLA7E2S9 258 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 SAPCD1Q5SSQ6 148 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 CRIP3Q6Q6R5 217 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 DOLPP1Q86YN1 238 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 WNT5BQ9H1J7 359 aa12.57□□□□□ -0.4
SPIDR-201ENST00000297423 NXPH2O95156 264 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 ARL14EPLP0DKL9 152 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 CCL3P10147 92 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 KLHDC1Q8N7A1 406 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 TCTEX1D1Q8N7M0 179 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 OCC1Q8TAD7 63 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 FBXL7Q9UJT9 491 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 CLDN15P56746 228 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-201ENST00000297423 PSMG3Q9BT73 122 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-201ENST00000297423 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.4
SPIDR-201ENST00000297423 STUMQ69YW2 141 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 OR4B1Q8NGF8 309 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 OR2Y1Q8NGV0 311 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 GPR35Q9HC97 309 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 DECR2Q9NUI1 292 aa12.56□□□□□ -0.4
SPIDR-201ENST00000297423 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
SPIDR-201ENST00000297423 GABRA2P47869 451 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 CEBPDP49716 269 aaPredicted RBP12.55□□□□□ -0.4
SPIDR-201ENST00000297423 PLP2Q04941 152 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 OR4A47Q6IF82 309 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 MRPL14Q6P1L8 145 aaKnown RBP12.55□□□□□ -0.4
SPIDR-201ENST00000297423 DHRS13Q6UX07 377 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 Q6ZPA2 131 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 NFAM1Q8NET5 270 aaPredicted RBP12.55□□□□□ -0.4
SPIDR-201ENST00000297423 CPT1CQ8TCG5 803 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms