RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF843Q8N446 348 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 PLEKHF2Q9H8W4 249 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 C19orf12Q9NSK7 152 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 A0A087X0M5 115 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 A0A1B0GX30 115 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 NUDT19A8MXV4 375 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 MBP02144 154 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 SERPINE2P07093 398 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 CLEC18CQ8NCF0 446 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 OR52M1Q8NGK5 317 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 IDI2-AS1Q9NZ38 188 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 OR5AC2Q9NZP5 309 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 LPAR3Q9UBY5 353 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 A6NNC1 897 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 ZNF705EA8MWA4 302 aaPredicted RBP12.82□□□□□ -0.36
LSM6-201ENST00000296581 DVL1O14640 695 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 RPL31P62899 125 aaKnown RBP12.82□□□□□ -0.36
LSM6-201ENST00000296581 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 OR10A7Q8NGE5 316 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 OR4D5Q8NGN0 318 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 ABHD14BQ96IU4 210 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 SPIN2AQ99865 258 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 SPIN2BQ9BPZ2 258 aa12.82□□□□□ -0.36
LSM6-201ENST00000296581 RAB4AP20338 218 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 ZNF134P52741 427 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
LSM6-201ENST00000296581 ZNF66Q6ZN08 573 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 IFI27L2Q9H2X8 130 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 HRNRQ86YZ3 2850 aaPredicted RBP12.81□□□□□ -0.36
LSM6-201ENST00000296581 IGKV1-39P01597 117 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
LSM6-201ENST00000296581 IGKV1D-39P04432 117 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 S100A10P60903 97 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 PKIAP61925 76 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 RPL30P62888 115 aaKnown RBP12.81□□□□□ -0.36
LSM6-201ENST00000296581 CATR1Q13166 79 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 ETV3LQ6ZN32 361 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
LSM6-201ENST00000296581 GAL3ST2Q9H3Q3 398 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 FAM212BQ9NTI7 297 aaPredicted RBP12.81□□□□□ -0.36
LSM6-201ENST00000296581 GAB2Q9UQC2 676 aa12.81□□□□□ -0.36
LSM6-201ENST00000296581 USF3Q68DE3 2245 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 MARCH11A6NNE9 402 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 DEDDO75618 318 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 C1QL1O75973 258 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 GOSR1O95249 250 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 GPR12P47775 334 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 UTF1Q5T230 341 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 FAM219AQ8IW50 185 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 TCTEX1D1Q8N7M0 179 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 ZNF439Q8NDP4 499 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 STOML3Q8TAV4 291 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
LSM6-201ENST00000296581 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
LSM6-201ENST00000296581 MMP26Q9NRE1 261 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 RPUSD1Q9UJJ7 312 aaKnown RBP12.8□□□□□ -0.36
LSM6-201ENST00000296581 LAMP3Q9UQV4 416 aa12.8□□□□□ -0.36
LSM6-201ENST00000296581 PROP1O75360 226 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 ZNF16P17020 682 aaPredicted RBP12.79□□□□□ -0.36
LSM6-201ENST00000296581 RAB5AP20339 215 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 RAB7AP51149 207 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
LSM6-201ENST00000296581 ARID1AO14497 2285 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 K7EPK0 472 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 MMP23AO75900 390 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 CLDN1O95832 211 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 SLC25A6P12236 298 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 HOXA5P20719 270 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 S100A2P29034 98 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 CT45A1Q5HYN5 189 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 PRAMEF5Q5TYX0 476 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 BTNL3Q6UXE8 466 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 FAM71E2Q8N5Q1 922 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 CT45A3Q8NHU0 189 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 AQP10Q96PS8 301 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 ABHD14AQ9BUJ0 271 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 UBTD1Q9HAC8 227 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 FAM96BQ9Y3D0 163 aa12.79□□□□□ -0.36
LSM6-201ENST00000296581 TSTD3H0UI37 97 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 MED6O75586 246 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 YIF1AO95070 293 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 DAOP14920 347 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 AKR1C3P42330 323 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 HEPN1Q6WQI6 88 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 H1FXQ92522 213 aaKnown RBP12.78□□□□□ -0.36
LSM6-201ENST00000296581 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
LSM6-201ENST00000296581 ZFYVE26Q68DK2 2539 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 YLPM1P49750 1951 aaKnown RBP12.78□□□□□ -0.36
LSM6-201ENST00000296581 A0A0G2JRQ6 117 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 hCG_1809904A0A1W2PP81 198 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 A0A1W2PR64 198 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 A0A1W2PRV1 198 aa12.78□□□□□ -0.36
LSM6-201ENST00000296581 LY6HO94772 140 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms