RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ZNF585BQ52M93 769 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 STUMQ69YW2 141 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 TMEM217Q8N7C4 229 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF645Q8N7E2 425 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 GALMQ96C23 342 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 CBLN4Q9NTU7 201 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 TMEM106BQ9NUM4 274 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 KCNS2Q9ULS6 477 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 RBM7Q9Y580 266 aaKnown RBP13.93□□□□□ -0.18
CPSF4-201ENST00000292476 PLCE1Q9P212 2302 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 CELSR2Q9HCU4 2923 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 CACNA1DQ01668 2161 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 CYB5R3P00387 301 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-201ENST00000292476 AESQ08117 197 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 HABP2Q14520 560 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-201ENST00000292476 KHDC3LQ587J8 217 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 DRAM1Q8N682 238 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 SCGB1C1Q8TD33 95 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 FAM216AQ8WUB2 273 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 RAB1BQ9H0U4 201 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 CENPEQ02224 2701 aa13.92□□□□□ -0.18
CPSF4-201ENST00000292476 PPIAL4EA0A075B759 164 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 A0A087WWC5 75 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 PPIAL4DF5H284 164 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 TMEM178BH3BS89 294 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 GPR37O15354 613 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 PPIHO43447 177 aaKnown RBP13.91□□□□□ -0.18
CPSF4-201ENST00000292476 SRP19P09132 144 aaKnown RBP13.91□□□□□ -0.18
CPSF4-201ENST00000292476 PPIAL4FP0DN26 164 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 CEACAM6P40199 344 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 SERF2P84101 59 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 Q6ZRM9 215 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 CD300LFQ8TDQ1 290 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 PSENENQ9NZ42 101 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 OR6C3Q9NZP0 311 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 PPIAL4AQ9Y536 164 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 UNC79Q9P2D8 2635 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 IGHV1-69-2A0A0G2JMI3 117 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 SPINT2O43291 252 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 SCAF4O95104 1147 aaKnown RBP13.91□□□□□ -0.18
CPSF4-201ENST00000292476 FSTL3O95633 263 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 OR13C7P0DN81 318 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 IGFBP2P18065 325 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 IL2RGP31785 369 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 CCL20P78556 96 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 ICAM4Q14773 271 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 SLC25A24Q6NUK1 477 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 ETV3LQ6ZN32 361 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF525Q8N782 197 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 CLDND2Q8NHS1 167 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 CCL17Q92583 94 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 COQ2Q96H96 371 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 SPOCK3Q9BQ16 436 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 ABHD14AQ9BUJ0 271 aa13.91□□□□□ -0.18
CPSF4-201ENST00000292476 CHD3Q12873 2000 aaKnown RBP13.9□□□□□ -0.18
CPSF4-201ENST00000292476 RUNX1Q01196 453 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 CATR1Q13166 79 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF788Q6ZQV5 615 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 ZCCHC24Q8N2G6 241 aaKnown RBP13.9□□□□□ -0.18
CPSF4-201ENST00000292476 SFT2D1Q8WV19 159 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 MBD3L1Q8WWY6 194 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 NINJ1Q92982 152 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 RARRES2Q99969 163 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 METRNQ9UJH8 293 aa13.9□□□□□ -0.18
CPSF4-201ENST00000292476 ANKHD1Q8IWZ3 2542 aaKnown RBP13.9□□□□□ -0.18
CPSF4-201ENST00000292476 ODAMA1E959 279 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 P0C879 139 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 RAB5AP20339 215 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 TMEM267Q0VDI3 215 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-201ENST00000292476 PMS2P11Q13670 270 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 CR1LQ2VPA4 569 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 LRRC75BQ2VPJ9 315 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 AKIRIN2Q53H80 203 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 THNSL2Q86YJ6 484 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 PINX1Q96BK5 328 aaKnown RBP13.89□□□□□ -0.19
CPSF4-201ENST00000292476 LAMP3Q9UQV4 416 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 TIMM9Q9Y5J7 89 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 ARID1AO14497 2285 aa13.89□□□□□ -0.19
CPSF4-201ENST00000292476 ZNF98A6NK75 572 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 NXPH3O95157 252 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 GLIPR1P48060 266 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
CPSF4-201ENST00000292476 EDDM3AQ14507 147 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 SLC35E3Q7Z769 313 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 IQCF2Q8IXL9 164 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 PRR18Q8N4B5 295 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 ZNRF1Q8ND25 227 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 NEU4Q8WWR8 484 aaPredicted RBP13.88□□□□□ -0.19
CPSF4-201ENST00000292476 HSPB7Q9UBY9 170 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 RFNGQ9Y644 331 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 TRAV39A0A0B4J263 110 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 LOC102723971A0A1B0GUV8 181 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 A0A1W2PPH5 198 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 C12orf77C9JDV5 145 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 GYPAP02724 150 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 AKR1C3P42330 323 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms