RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 HACD4Q5VWC8 232 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 GVQW1Q8N7I0 195 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.61□□□□□ -1.19
CCDC58-201ENST00000291458 LFNGQ8NES3 379 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 OR11H1Q8NG94 326 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 ARPC1AQ92747 370 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 FLYWCH2Q96CP2 140 aaKnown RBP7.61□□□□□ -1.19
CCDC58-201ENST00000291458 DCUN1D5Q9BTE7 237 aa7.61□□□□□ -1.19
CCDC58-201ENST00000291458 A0A087WXM4 84 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 IGKV1D-13A0A0B4J2D9 117 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 LINC00473A8K010 186 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 SEC14L6B5MCN3 397 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ARPC1BO15143 372 aaKnown RBP7.6□□□□□ -1.19
CCDC58-201ENST00000291458 SCGNO76038 276 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 LY86O95711 162 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 IGKV1-13P0DP09 117 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 PPIFP30405 207 aaKnown RBP7.6□□□□□ -1.19
CCDC58-201ENST00000291458 CDX1P47902 265 aaPredicted RBP7.6□□□□□ -1.19
CCDC58-201ENST00000291458 RAB9AP51151 201 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 SLURP1P55000 103 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ARL6IP1Q15041 203 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 TNXAQ16473 311 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 TIMM50Q3ZCQ8 353 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ZNF260Q3ZCT1 412 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ZNF660Q6AZW8 331 aaPredicted RBP7.6□□□□□ -1.19
CCDC58-201ENST00000291458 KCTD9Q7L273 389 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ZNF491Q8N8L2 437 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 OR5T1Q8NG75 326 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 OR5M8Q8NGP6 311 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ACOT12Q8WYK0 555 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 PRR25Q96S07 402 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 GPHA2Q96T91 129 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 PHB2Q99623 299 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 VSIG4Q9Y279 399 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 ETV7Q9Y603 341 aa7.6□□□□□ -1.19
CCDC58-201ENST00000291458 MPPED1O15442 326 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 TNFSF12O43508 249 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 FCGR3BO75015 233 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 SPDEFO95238 335 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 DUS4LO95620 317 aaKnown RBP7.59□□□□□ -1.19
CCDC58-201ENST00000291458 IGLV2-23P01705 113 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 TRGV3P03979 118 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 EGR2P11161 476 aaPredicted RBP7.59□□□□□ -1.19
CCDC58-201ENST00000291458 SLC6A1P30531 599 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 FXYD4P59646 89 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 NCS1P62166 190 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 ZNF616Q08AN1 781 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 ZNF645Q8N7E2 425 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 RNF152Q8N8N0 203 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 BEST4Q8NFU0 473 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 OR1N2Q8NGR9 330 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 SECTM1Q8WVN6 248 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 TCTEX1D2Q8WW35 142 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 YIPF6Q96EC8 236 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 MCRIP2Q9BUT9 160 aaKnown RBP7.59□□□□□ -1.19
CCDC58-201ENST00000291458 GPR61Q9BZJ8 451 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 GHITMQ9H3K2 345 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 IFT46Q9NQC8 304 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC58-201ENST00000291458 COA4Q9NYJ1 87 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 TAS2R8Q9NYW2 309 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 ANXA10Q9UJ72 324 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 SPATA2Q9UM82 520 aa7.59□□□□□ -1.19
CCDC58-201ENST00000291458 IGHV4OR15-8A0A075B7B6 117 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 A0A087WW49 117 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 ANKRD34BA5PLL1 514 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 SRRM4A7MD48 611 aaKnown RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 SAA1P0DJI8 122 aaPredicted RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 AADACP22760 399 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 DUTP33316 252 aaKnown RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 ECI1P42126 302 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 PITPNAQ00169 270 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 TMEM267Q0VDI3 215 aaPredicted RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 KIAA0141Q14154 515 aaPredicted RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 VMA21Q3ZAQ7 101 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 C19orf54Q5BKX5 351 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 RNASE12Q5GAN4 147 aaKnown RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 C10orf55Q5SWW7 151 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 ASPHD1Q5U4P2 390 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 CNIH2Q6PI25 160 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 TMEM17Q86X19 198 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 VKORC1L1Q8N0U8 176 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 SAMD12Q8N8I0 201 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 MINDY2Q8NBR6 621 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 MYOZ3Q8TDC0 251 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 TOLLIPQ9H0E2 274 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 DIABLOQ9NR28 239 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 RBMX2Q9Y388 322 aaKnown RBP7.58□□□□□ -1.2
CCDC58-201ENST00000291458 OR2W1Q9Y3N9 320 aa7.58□□□□□ -1.2
CCDC58-201ENST00000291458 LOC100996750A0A140TA64 210 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 I3L521 148 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 DIRAS3O95661 229 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 LGALS1P09382 135 aaKnown RBP7.57□□□□□ -1.2
CCDC58-201ENST00000291458 OR8U8P0C7N1 319 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 RRASP10301 218 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 FCGR2CP31995 323 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 RPS19P39019 145 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms