RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 UCP3P55916 312 aa21.26■□□□□ 0.99
SSU72-201ENST00000291386 SRSF4Q08170 494 aaKnown RBP21.26■□□□□ 0.99
SSU72-201ENST00000291386 PSG5Q15238 335 aa21.26■□□□□ 0.99
SSU72-201ENST00000291386 LIN54Q6MZP7 749 aa21.26■□□□□ 0.99
SSU72-201ENST00000291386 LPCAT3Q6P1A2 487 aa21.26■□□□□ 0.99
SSU72-201ENST00000291386 IGLV2-23P01705 113 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 IFNA6P05013 189 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 STEAP1BQ6NZ63 245 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 LHFPL1Q86WI0 220 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 FOXRED2Q8IWF2 684 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 OSR1Q8TAX0 266 aaPredicted RBP21.25■□□□□ 0.99
SSU72-201ENST00000291386 HSPB9Q9BQS6 159 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 FBXL15Q9H469 300 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 ZNF580Q9UK33 172 aa21.25■□□□□ 0.99
SSU72-201ENST00000291386 LINC01548A6NM66 108 aa21.24■□□□□ 0.99
SSU72-201ENST00000291386 ZNF79Q15937 498 aa21.24■□□□□ 0.99
SSU72-201ENST00000291386 AADACL3Q5VUY0 350 aa21.24■□□□□ 0.99
SSU72-201ENST00000291386 CHPT1Q8WUD6 406 aa21.24■□□□□ 0.99
SSU72-201ENST00000291386 TCTEX1D2Q8WW35 142 aa21.24■□□□□ 0.99
SSU72-201ENST00000291386 HARBI1Q96MB7 349 aa21.24■□□□□ 0.99
SSU72-201ENST00000291386 AP4M1O00189 453 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 FCGR3BO75015 233 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 RAB3DO95716 219 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 KIR2DS2P43631 304 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 BRWD1-AS2P59051 145 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 MEF2DQ14814 521 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 SPANXN2Q5MJ10 180 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 THAP7Q9BT49 309 aaPredicted RBP21.23■□□□□ 0.99
SSU72-201ENST00000291386 RSRP1Q9BUV0 290 aa21.23■□□□□ 0.99
SSU72-201ENST00000291386 METTL1Q9UBP6 276 aaKnown RBP21.23■□□□□ 0.99
SSU72-201ENST00000291386 IGHV7-81A0A0B4J1V7 117 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 ANKRD20A5PA0PJZ0 165 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 SRRM4A7MD48 611 aaKnown RBP21.22■□□□□ 0.99
SSU72-201ENST00000291386 GPR31O00270 319 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 SHOXO15266 292 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 TNFSF12O43508 249 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 CRYZL1O95825 349 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 IGF1P05019 195 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 CRYGBP07316 175 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 CATR1Q13166 79 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 CENPVQ7Z7K6 275 aaPredicted RBP21.22■□□□□ 0.99
SSU72-201ENST00000291386 OR4D10Q8NGI6 311 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 OR4S2Q8NH73 311 aa21.22■□□□□ 0.99
SSU72-201ENST00000291386 RBFOX2O43251 390 aaKnown RBP eCLIP21.21■□□□□ 0.99
SSU72-201ENST00000291386 ZNF735P0CB33 412 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 AKAIN1P0CW23 69 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 PYDC2Q56P42 97 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 CMTM1Q8IZ96 169 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 STPG2Q8N412 459 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 GPHA2Q96T91 129 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 OR51J1Q9H342 316 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 BATF3Q9NR55 127 aa21.21■□□□□ 0.99
SSU72-201ENST00000291386 SLC25A17O43808 307 aa21.2■□□□□ 0.98
SSU72-201ENST00000291386 PGLYRP1O75594 196 aaPredicted RBP21.2■□□□□ 0.98
SSU72-201ENST00000291386 PLGLAQ15195 96 aa21.2■□□□□ 0.98
SSU72-201ENST00000291386 SLC38A6Q8IZM9 456 aa21.2■□□□□ 0.98
SSU72-201ENST00000291386 Q8N402 240 aa21.2■□□□□ 0.98
SSU72-201ENST00000291386 OR5AU1Q8NGC0 362 aa21.2■□□□□ 0.98
SSU72-201ENST00000291386 NOL4LQ96MY1 436 aaPredicted RBP21.2■□□□□ 0.98
SSU72-201ENST00000291386 PSMB11A5LHX3 300 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 FBXO24O75426 580 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 UBE2KP61086 200 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 ZNF562Q6V9R5 426 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 TEX45Q8NA69 505 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 TERB2Q8NHR7 220 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 TRIM63Q969Q1 353 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 GON7Q9BXV9 100 aa21.19■□□□□ 0.98
SSU72-201ENST00000291386 DISC1C4P0D8 188 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 FCN1O00602 326 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 CX3CL1P78423 397 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 VMA21Q3ZAQ7 101 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 OR2B11Q5JQS5 317 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 PPP1R27Q86WC6 154 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 SPAG16Q8N0X2 631 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 OR4C16Q8NGL9 310 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 CD300LFQ8TDQ1 290 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 ZNF486Q96H40 463 aaPredicted RBP21.18■□□□□ 0.98
SSU72-201ENST00000291386 SRRQ9GZT4 340 aa21.18■□□□□ 0.98
SSU72-201ENST00000291386 PLXNB1O43157 2135 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 CD28P10747 220 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 CRIP2P52943 208 aaPredicted RBP21.17■□□□□ 0.98
SSU72-201ENST00000291386 SLC35B1P78383 322 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 LINC00299Q6ZSB3 139 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 TCTEX1D1Q8N7M0 179 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 SGMS2Q8NHU3 365 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 TPSG1Q9NRR2 321 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 LINC00527Q9UJ94 153 aa21.17■□□□□ 0.98
SSU72-201ENST00000291386 TET2Q6N021 2002 aaPredicted RBP21.16■□□□□ 0.98
SSU72-201ENST00000291386 ATP6V0E1O15342 81 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 S100GP29377 79 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 CD83Q01151 205 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 CNPY1Q3B7I2 92 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 COMMD1Q8N668 190 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 OR51H1Q8NH63 302 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 DEDD2Q8WXF8 326 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 SLC2A8Q9NY64 477 aa21.16■□□□□ 0.98
SSU72-201ENST00000291386 RAMP3O60896 148 aa21.15■□□□□ 0.98
SSU72-201ENST00000291386 HPRT1P00492 218 aa21.15■□□□□ 0.98
SSU72-201ENST00000291386 CA2P00918 260 aa21.15■□□□□ 0.98
SSU72-201ENST00000291386 RLN1P04808 185 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms