RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 SHOXO15266 292 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 CNTFRP26992 372 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 RAB7AP51149 207 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 H2BFWTQ7Z2G1 175 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 PRELID3BQ9Y3B1 194 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 A0A0B4J2A0 478 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
ACER3-201ENST00000278544 CST7O76096 145 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 TOX4O94842 621 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 SPDEFO95238 335 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 VDAC1P21796 283 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
ACER3-201ENST00000278544 RND3P61587 244 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 Q5PR19 223 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 RPEQ96AT9 228 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 SHPKQ9UHJ6 478 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 RHOVQ96L33 236 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 TMEM56Q96MV1 263 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 HSD17B10Q99714 261 aaKnown RBP10.81□□□□□ -0.68
ACER3-201ENST00000278544 SEBOXQ9HB31 216 aaPredicted RBP10.81□□□□□ -0.68
ACER3-201ENST00000278544 RAB9BQ9NP90 201 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 TMEM56-RWDD3S4R434 201 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 PDZD2O15018 2839 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 NF1P21359 2839 aa10.81□□□□□ -0.68
ACER3-201ENST00000278544 FAM24AA6NFZ4 105 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 TEX46H3BTG2 121 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 OR9G9P0C7N8 305 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 OR8H1Q8NGG4 311 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 Q96MF0 132 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 TNFRSF19Q9NS68 423 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 INSIG2Q9Y5U4 225 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 RNF212BA8MTL3 300 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 CHST1O43916 411 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 IFNA17P01571 189 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 FBLN7Q53RD9 439 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 hCG_1809904A0A1W2PP81 198 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 A0A1W2PPE2 198 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 A0A1W2PR64 198 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 A0A1W2PRV1 198 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 RNASEK-C17orf49H0YIS7 233 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 LGALS4P56470 323 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
ACER3-201ENST00000278544 WFDC11Q8NEX6 87 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 TMED3Q9Y3Q3 217 aa10.8□□□□□ -0.68
ACER3-201ENST00000278544 A0A1W2PPH5 198 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 K7EPK0 472 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 TGFAP01135 160 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 PJVKQ0ZLH3 352 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 CLINT1Q14677 625 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 SMCO1Q147U7 214 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 DYNAPQ8N1N2 210 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 FAM71E2Q8N5Q1 922 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 OR13D1Q8NGV5 346 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 RAB39BQ96DA2 213 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 BAHCC1Q9P281 2608 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 POM121CA8CG34 1229 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 NHLH2Q02577 135 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 TMEM267Q0VDI3 215 aaPredicted RBP10.79□□□□□ -0.68
ACER3-201ENST00000278544 NMSQ5H8A3 153 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 C10orf55Q5SWW7 151 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 HARBI1Q96MB7 349 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 TPSG1Q9NRR2 321 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 TEP1Q99973 2627 aaKnown RBP10.79□□□□□ -0.68
ACER3-201ENST00000278544 TRAV40A0A0B4J280 105 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 HLA-DRB5Q30154 266 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 OR4P4Q8NGL7 312 aa10.79□□□□□ -0.68
ACER3-201ENST00000278544 ZNF471Q9BX82 626 aaPredicted RBP10.79□□□□□ -0.68
ACER3-201ENST00000278544 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
ACER3-201ENST00000278544 ST8SIA3O43173 380 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 SLC25A17O43808 307 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 TMEM50AO95807 157 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 CFDP00746 253 aaPredicted RBP10.78□□□□□ -0.68
ACER3-201ENST00000278544 GNB1P62873 340 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 EIF4EBP1Q13541 118 aaPredicted RBP10.78□□□□□ -0.68
ACER3-201ENST00000278544 DEFB113Q30KQ7 82 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 SPANXN5Q5MJ07 72 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
ACER3-201ENST00000278544 PPP1R14BQ96C90 147 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 NMES1Q9C002 83 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 C7orf69Q9H7B7 122 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 TMEM140Q9NV12 185 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 LPAR3Q9UBY5 353 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 BUB1B-PAK6H3BSN5 160 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 TIMM23O14925 209 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 PRRX1P54821 245 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 IFITM2Q01629 132 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 TMUB2Q71RG4 321 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 CLEC18AA5D8T8 446 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 SH2D7A6NKC9 451 aaPredicted RBP10.78□□□□□ -0.68
ACER3-201ENST00000278544 RLN2P04090 185 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 USF1P22415 310 aaPredicted RBP10.78□□□□□ -0.68
ACER3-201ENST00000278544 CYCSP99999 105 aaKnown RBP10.78□□□□□ -0.68
ACER3-201ENST00000278544 C11orf91Q3C1V1 193 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 ALKAL2Q6UX46 152 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 CLEC18CQ8NCF0 446 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 RFNGQ9Y644 331 aa10.78□□□□□ -0.68
ACER3-201ENST00000278544 TET2Q6N021 2002 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms