RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IMPA1P29218 277 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 GGT2P36268 569 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 LGALS7P47929 136 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 CACNG7P62955 275 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
CD44-202ENST00000278385 DEFA6Q01524 100 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 ZNF763Q0D2J5 394 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 AGTRAPQ6RW13 159 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 TBPL2Q6SJ96 375 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 Q6ZS92 163 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 NOTCH2NLQ7Z3S9 236 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 C6orf120Q7Z4R8 191 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 NR2C2APQ86WQ0 139 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 METTL27Q8N6F8 245 aaPredicted RBP3.53□□□□□ -1.84
CD44-202ENST00000278385 SLC35G3Q8N808 338 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 BEST4Q8NFU0 473 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 OR51A2Q8NGJ7 313 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 OR10J6PQ8NGY7 276 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 ZNRF2Q8NHG8 242 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 SECTM1Q8WVN6 248 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.53□□□□□ -1.84
CD44-202ENST00000278385 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 RNF185Q96GF1 192 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 CAPZA3Q96KX2 299 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 LINC00477Q96M19 166 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 OR52E6Q96RD3 313 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 METTL26Q96S19 204 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 EBF4Q9BQW3 602 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 CHST5Q9GZS9 411 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 PLSCR3Q9NRY6 295 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 TMEM100Q9NV29 134 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 C14orf105Q9NVL8 296 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 MTFP1Q9UDX5 166 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 PSG8Q9UQ74 426 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 WSB1Q9Y6I7 421 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 AKAP13Q12802 2813 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 KIF26BQ2KJY2 2108 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 DMXL2Q8TDJ6 3036 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 FREM2Q5SZK8 3169 aa3.53□□□□□ -1.85
CD44-202ENST00000278385 AHCTF1Q8WYP5 2266 aa3.53□□□□□ -1.85
CD44-202ENST00000278385 CFAP47Q6ZTR5 3102 aa3.53□□□□□ -1.85
CD44-202ENST00000278385 SCN8AQ9UQD0 1980 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 SDK2Q58EX2 2172 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 MAP1LC3B2A6NCE7 125 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 EEF1E1-BLOC1S5C9J1V9 151 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 XKRYO14609 159 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 EEF1E1O43324 174 aaKnown RBP3.52□□□□□ -1.85
CD44-202ENST00000278385 BANF1O75531 89 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 GCM2O75603 506 aaPredicted RBP3.52□□□□□ -1.85
CD44-202ENST00000278385 TRMUO75648 421 aaKnown RBP3.52□□□□□ -1.85
CD44-202ENST00000278385 SPNP16150 400 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 CXCL2P19875 107 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 AGTR1P30556 359 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 S100A7P31151 101 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 H2BFSP57053 126 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 TBPL1P62380 186 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 CAV1Q03135 178 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 CD47Q08722 323 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 NSDHLQ15738 373 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 C17orf58Q2M2W7 97 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 ZNF718Q3SXZ3 478 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 WDR38Q5JTN6 314 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 TSPO2Q5TGU0 170 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 RSBN1Q5VWQ0 802 aaPredicted RBP3.52□□□□□ -1.85
CD44-202ENST00000278385 FBXW9Q5XUX1 488 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 DGAT2L6Q6ZPD8 337 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 SHISA6Q6ZSJ9 500 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 LRRC28Q86X40 367 aaPredicted RBP3.52□□□□□ -1.85
CD44-202ENST00000278385 CDC20BQ86Y33 519 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 DOLPP1Q86YN1 238 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 FAM71E2Q8N5Q1 922 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 TMEM178AQ8NBL3 297 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 C11orf72Q8NBR9 251 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 PLPP5Q8NEB5 264 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 OR11G2Q8NGC1 345 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 OR10AD1Q8NGE0 317 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 OR52L1Q8NGH7 329 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 OR9I1Q8NGQ6 314 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 OR5J2Q8NH18 312 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 OR1S1Q8NH92 325 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 DNAJC9Q8WXX5 260 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 GMPPAQ96IJ6 420 aaPredicted RBP3.52□□□□□ -1.85
CD44-202ENST00000278385 MAP1LC3BQ9GZQ8 125 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 MOB1AQ9H8S9 216 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 POPDC3Q9HBV1 291 aa3.52□□□□□ -1.85
CD44-202ENST00000278385 FER1L5A0AVI2 2057 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 IGHV3OR16-13A0A075B7E8 117 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 IGHV1-45A0A0A0MS14 117 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 TRAV17A0A0B4J275 112 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 TRGV8A0A0C4DH27 118 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 A0A1W2PRE2 83 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 C8orf87E5RJ46 101 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 AGPAT2O15120 278 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 CCDC22O60826 627 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms