RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 FAM90A13PP0C7W8 464 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 FAM90A14PP0C7W9 464 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 FAM90A24PP0C7X0 464 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 NPBWR2P48146 333 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 SMIM21Q3B7S5 101 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 TUSC5Q8IXB3 177 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 TMEM54Q969K7 222 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 TMEM45BQ96B21 275 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 UCP1P25874 307 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 CAMPP49913 170 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 PLGLAQ15195 96 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 AARDQ4LEZ3 155 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 OR10S1Q8NGN2 331 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 C18orf12Q96KH6 178 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 SIGLEC12Q96PQ1 595 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 DECR2Q9NUI1 292 aa9.84□□□□□ -0.83
CLSTN3-201ENST00000266546 CXorf1O96002 111 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 OR4P4Q8NGL7 312 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 R3HDM4Q96D70 268 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 M0R2Z0 102 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CT45A6P0DMU7 189 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CT45A5P0DMU8 189 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CT45A7P0DMV0 189 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CT45A1Q5HYN5 189 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 FGFRL1Q8N441 504 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CT45A3Q8NHU0 189 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 MISP3Q96FF7 219 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 GMPPAQ96IJ6 420 aaPredicted RBP9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 DOCK7Q96N67 2140 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 MRPL13Q9BYD1 178 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 COMMD5Q9GZQ3 224 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 SEBOXQ9HB31 216 aaPredicted RBP9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CD99P14209 185 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 CD1BP29016 333 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 GTF3AQ92664 365 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 LINC00470Q9BZP3 86 aa9.83□□□□□ -0.84
CLSTN3-201ENST00000266546 USF3Q68DE3 2245 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 J3QT63 122 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 SRSF10O75494 262 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 Q0VFX4 171 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 SCGB2A2Q13296 93 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 ZNF738Q8NE65 137 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 WIPI2Q9Y4P8 454 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 PCDH15Q96QU1 1955 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 PHF3Q92576 2039 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 HELTA6NFD8 242 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 ZNHIT1O43257 154 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 NEURL1O76050 574 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 HPRT1P00492 218 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 RFPL3SP0C7P2 107 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 EGR1P18146 543 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 USF1P22415 310 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 SUB1P53999 127 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 LCN2P80188 198 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 QRFPP83859 136 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 PSG5Q15238 335 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 ZBTB34Q8NCN2 500 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 TMEM167BQ9NRX6 74 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 UQCR10Q9UDW1 63 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 CDIPTO14735 213 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 COX7A2P2O60397 106 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 ERHP84090 104 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 CEACAM21Q3KPI0 293 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 LINC00596Q86U02 117 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 LRTM2Q8N967 370 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 CCDC168Q8NDH2 2452 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 A0A1B0GW64 132 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 EFNA2O43921 213 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 VENTXO95231 258 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 IGHV2-5P01817 119 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 TNFSF10P50591 281 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 BPIFB3P59826 476 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 SLC35B1P78383 322 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 NRN1LQ496H8 165 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 SPATA45Q537H7 98 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 RNF144BQ7Z419 303 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 WBP1Q96G27 269 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 POM121L2Q96KW2 1035 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 HSD17B10Q99714 261 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 SRXN1Q9BYN0 137 aa9.82□□□□□ -0.84
CLSTN3-201ENST00000266546 AHRRA9YTQ3 701 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 AMBPP02760 352 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 HIST3H3Q16695 136 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 NAV3Q8IVL0 2385 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 FAM90A26D6RGX4 464 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 MT-ND6P03923 174 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 RTL8BQ17RB0 113 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 KHDC1LQ5JSQ8 128 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 IGF2-ASQ6U949 168 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 DEFB108BQ8NET1 73 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 PRSS33Q8NF86 280 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 FDCSPQ8NFU4 85 aa9.81□□□□□ -0.84
CLSTN3-201ENST00000266546 OR4D5Q8NGN0 318 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms