RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 OR5H6Q8NGV6 325 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 DDB2Q92466 427 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 ALX4Q9H161 411 aaPredicted RBP12.45□□□□□ -0.42
USE1-201ENST00000263897 OR2W1Q9Y3N9 320 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 LINC00473A8K010 186 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 SHOXO15266 292 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 HLA-DQB1P01920 261 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 NFYAP23511 347 aaPredicted RBP12.44□□□□□ -0.42
USE1-201ENST00000263897 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
USE1-201ENST00000263897 GRPEL2Q8TAA5 225 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 DCUN1D4Q92564 292 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 RHOVQ96L33 236 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 SLA2Q9H6Q3 261 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
USE1-201ENST00000263897 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 J3QRK9 145 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
USE1-201ENST00000263897 INSL3P51460 131 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 TEX45Q8NA69 505 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 OR5T1Q8NG75 326 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 SLC25A38Q96DW6 304 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
USE1-201ENST00000263897 A0A0A6YYH2 397 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 A6NJ64 397 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 LINC01619G3V211 115 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 OVOL1O14753 267 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 TMEM127O75204 238 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 SLC22A5O76082 557 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 IGHV3-11P01762 117 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 TRGV3P03979 118 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 ECI1P42126 302 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 TPPP2P59282 170 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 DCTN2Q13561 401 aaKnown RBP12.42□□□□□ -0.42
USE1-201ENST00000263897 MRGPRG-AS1Q2M3A8 158 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
USE1-201ENST00000263897 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 ZNF355PQ9NSJ1 428 aa12.42□□□□□ -0.42
USE1-201ENST00000263897 IGHV4OR15-8A0A075B7B6 117 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 A0A087WW49 117 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 H3BUA1 57 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 CRYZL1O95825 349 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 HSPB1P04792 205 aaKnown RBP12.41□□□□□ -0.42
USE1-201ENST00000263897 SLURP1P55000 103 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 UBE2KP61086 200 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 VMA21Q3ZAQ7 101 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 TIMM50Q3ZCQ8 353 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 POC5Q8NA72 575 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 OSR1Q8TAX0 266 aaPredicted RBP12.41□□□□□ -0.42
USE1-201ENST00000263897 B9D2Q9BPU9 175 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 DIABLOQ9NR28 239 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
USE1-201ENST00000263897 RBMX2Q9Y388 322 aaKnown RBP12.41□□□□□ -0.42
USE1-201ENST00000263897 LSM4Q9Y4Z0 139 aaKnown RBP12.41□□□□□ -0.42
USE1-201ENST00000263897 COL7A1Q02388 2944 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 A0A087WXM4 84 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 TUSC2O75896 110 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 CD69Q07108 199 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 PRSS8Q16651 343 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 BEST4Q8NFU0 473 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 YIPF6Q96EC8 236 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 PRR25Q96S07 402 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 AUNIPQ9H7T9 357 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
USE1-201ENST00000263897 A0A0G2JLM5 398 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 AIREO43918 545 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 FCGR3BO75015 233 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 BRI3O95415 125 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 TGFBR1P36897 503 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 RPS19P39019 145 aaKnown RBP12.39□□□□□ -0.43
USE1-201ENST00000263897 RPL30P62888 115 aaKnown RBP12.39□□□□□ -0.43
USE1-201ENST00000263897 IDO2Q6ZQW0 420 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 HOGA1Q86XE5 327 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 CROCCP3Q8IVE0 287 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 GVQW1Q8N7I0 195 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 DCUN1D5Q9BTE7 237 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
USE1-201ENST00000263897 ZNF256Q9Y2P7 627 aaPredicted RBP12.39□□□□□ -0.43
USE1-201ENST00000263897 C13orf42A0A1B0GVH6 325 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 TNFAIP8O95379 198 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 ARPC4P59998 168 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 EIF4EBP1Q13541 118 aaPredicted RBP12.38□□□□□ -0.43
USE1-201ENST00000263897 TNXAQ16473 311 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 VAX1Q5SQQ9 334 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 OVCH2Q7RTZ1 564 aa12.38□□□□□ -0.43
USE1-201ENST00000263897 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
USE1-201ENST00000263897 TINAGL1Q9GZM7 467 aaPredicted RBP12.38□□□□□ -0.43
USE1-201ENST00000263897 SAP30O75446 220 aa12.37□□□□□ -0.43
USE1-201ENST00000263897 SAA1P0DJI8 122 aaPredicted RBP12.37□□□□□ -0.43
USE1-201ENST00000263897 PTHLHP12272 177 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms