RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SCGB1D2O95969 90 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 SAA2P0DJI9 122 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 HTR2BP41595 481 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 LMO4P61968 165 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 NCR3LG1Q68D85 454 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 FAM71E2Q8N5Q1 922 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 C8orf46Q8TAG6 207 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 GPR146Q96CH1 333 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 RRNAD1Q96FB5 475 aaKnown RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 FAM212BQ9NTI7 297 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 ZNRD1Q9P1U0 126 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 SONP18583 2426 aaKnown RBP14.24□□□□□ -0.13
SRSF1-201ENST00000258962 C2CD3Q4AC94 2353 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 B4DSR2 109 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 BCL2L11O43521 198 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 DEDDO75618 318 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 AP2S1P53680 142 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-201ENST00000258962 EXOSC2Q13868 293 aaKnown RBP14.24□□□□□ -0.13
SRSF1-201ENST00000258962 THOC7Q6I9Y2 204 aaKnown RBP14.24□□□□□ -0.13
SRSF1-201ENST00000258962 FOXRED2Q8IWF2 684 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 SPAG16Q8N0X2 631 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 LYG1Q8N1E2 194 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 TCTEX1D1Q8N7M0 179 aa14.24□□□□□ -0.13
SRSF1-201ENST00000258962 LSM10Q969L4 123 aaKnown RBP14.24□□□□□ -0.13
SRSF1-201ENST00000258962 LSM5Q9Y4Y9 91 aaKnown RBP14.24□□□□□ -0.13
SRSF1-201ENST00000258962 RAB29O14966 203 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 S1PR2O95136 353 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 EIF5AP63241 154 aaKnown RBP14.23□□□□□ -0.13
SRSF1-201ENST00000258962 ZNF816Q0VGE8 651 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-201ENST00000258962 IZUMO4Q1ZYL8 232 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 FAM210AQ96ND0 272 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 ARPC5LQ9BPX5 153 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 PLEKHA2Q9HB19 425 aa14.23□□□□□ -0.13
SRSF1-201ENST00000258962 A0A087X0M5 115 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 A0A1B0GX30 115 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 MSGN1A6NI15 193 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 C22orf46C9J442 243 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 TAAR5O14804 337 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 ATG12O94817 140 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 IGHV1-8P0DP01 117 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 EPHA1P21709 976 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 Q6ZRM9 215 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 LY6G5BQ8NDX9 201 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 DDB2Q92466 427 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 C1orf159Q96HA4 380 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 POMT1Q9Y6A1 747 aa14.22□□□□□ -0.13
SRSF1-201ENST00000258962 FN1P02751 2386 aaKnown RBP14.22□□□□□ -0.13
SRSF1-201ENST00000258962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.22□□□□□ -0.138e-11■■■■□ 20.4
SRSF1-201ENST00000258962 NSD1Q96L73 2696 aaPredicted RBP14.21□□□□□ -0.13
SRSF1-201ENST00000258962 E5RGE8 158 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 ST8SIA3O43173 380 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 PITX3O75364 302 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 P0C879 139 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 SLC25A6P12236 298 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 AKR1C2P52895 323 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 GNB2P62879 340 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 CXorf66Q5JRM2 361 aaPredicted RBP14.21□□□□□ -0.13
SRSF1-201ENST00000258962 CLLU1Q5K131 121 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 C8orf31Q8N9H6 132 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 ZNF596Q8TC21 504 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 SCARB1Q8WTV0 552 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 PHYHIPLQ96FC7 376 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 AQP10Q96PS8 301 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 LPAR2Q9HBW0 351 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 RCL1Q9Y2P8 373 aaKnown RBP14.21□□□□□ -0.13
SRSF1-201ENST00000258962 NSG2Q9Y328 171 aa14.21□□□□□ -0.13
SRSF1-201ENST00000258962 PPIAL4CA0A0B4J2A2 164 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 A0A1B0GU03 582 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 FAM157AC9JC47 383 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 FCGR3BO75015 233 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 IGHV2-5P01817 119 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 PPIAL4GP0DN37 164 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 PVALBP20472 110 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-201ENST00000258962 NKX2-1P43699 371 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-201ENST00000258962 SLC7A5P1Q8MH63 180 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 LINC00311Q8N616 119 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 RNASE11Q8TAA1 199 aaKnown RBP14.2□□□□□ -0.14
SRSF1-201ENST00000258962 C11orf1Q9H5F2 150 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 ZC4H2Q9NQZ6 224 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 MMP24Q9Y5R2 645 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 SESN1Q9Y6P5 492 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 ARHGAP32A7KAX9 2087 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 NIPBLQ6KC79 2804 aaeCLIP14.2□□□□□ -0.14
SRSF1-201ENST00000258962 MSMBP08118 114 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 G6PCP35575 357 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 DVL1P1P54792 670 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-201ENST00000258962 ID3Q02535 119 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 ZNF833PQ6ZTB9 187 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 ZNF383Q8NA42 475 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 DMBX1Q8NFW5 382 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 SSBP3Q9BWW4 388 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-201ENST00000258962 TMEM160Q9NX00 188 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 CACNG5Q9UF02 275 aa14.2□□□□□ -0.14
SRSF1-201ENST00000258962 KIAA1324LA8MWY0 1029 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-201ENST00000258962 J3QR06 171 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 RBFOX2O43251 390 aaKnown RBP eCLIP14.19□□□□□ -0.144e-10■■■■□ 23
SRSF1-201ENST00000258962 CRLF1O75462 422 aa14.19□□□□□ -0.14
SRSF1-201ENST00000258962 CFDP00746 253 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms