RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ROS1P08922 2347 aa21.26■□□□□ 0.99
RAB40C-201ENST00000248139 TUBG1P23258 451 aa21.26■□□□□ 0.99
RAB40C-201ENST00000248139 ZNF718Q3SXZ3 478 aa21.26■□□□□ 0.99
RAB40C-201ENST00000248139 RPL39P5Q59GN2 51 aa21.26■□□□□ 0.99
RAB40C-201ENST00000248139 NPCDR1Q9BY65 106 aa21.26■□□□□ 0.99
RAB40C-201ENST00000248139 GALR2O43603 387 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-201ENST00000248139 AURKAIP1Q9NWT8 199 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-201ENST00000248139 GVINP1Q7Z2Y8 2422 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 B4DEV8 164 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 HOXB1P14653 301 aaPredicted RBP21.25■□□□□ 0.99
RAB40C-201ENST00000248139 SMIM21Q3B7S5 101 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 GNG12Q9UBI6 72 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 PLCE1Q9P212 2302 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 C15orf65H3BRN8 121 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 PAGE4O60829 102 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 IFNA1P01562 189 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 SELLP14151 372 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 PNRC1Q12796 327 aaPredicted RBP21.25■□□□□ 0.99
RAB40C-201ENST00000248139 C16orf82Q7Z2V1 217 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 P2RX4Q99571 388 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 PTPRBP23467 1997 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 ADGRG4Q8IZF6 3080 aa21.25■□□□□ 0.99
RAB40C-201ENST00000248139 IGKV1D-17A0A075B6S4 117 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 NKX6-1P78426 367 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-201ENST00000248139 R3HDM4Q96D70 268 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 SNX22Q96L94 193 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 ELOVL1Q9BW60 279 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 GAR1Q9NY12 217 aaKnown RBP21.24■□□□□ 0.99
RAB40C-201ENST00000248139 TRAV3A0A0B4J244 114 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 ZNF83P51522 516 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 DEFB109BQ30KR1 87 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 PARLQ9H300 379 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 DKK4Q9UBT3 224 aa21.24■□□□□ 0.99
RAB40C-201ENST00000248139 TRAV38-1A0A0B4J264 116 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 SMCO3A2RU48 225 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 RAB29O14966 203 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 ZNF134P52741 427 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 Q8TCH9 128 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 TAAR6Q96RI8 345 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 C15orf62A8K5M9 175 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 TNFSF13O75888 250 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 CRYAAP02489 173 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 S100A2P29034 98 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 GPR12P47775 334 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 RND2P52198 227 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 EDDM3BP56851 147 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 RPRMLQ8N4K4 120 aa21.23■□□□□ 0.99
RAB40C-201ENST00000248139 CTXND1A0A1B0GTU2 59 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 SPINT2O43291 252 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 KITLGP21583 273 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 PSMB3P49720 205 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 UBE2G2P60604 165 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 TMEM241Q24JQ0 296 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 ACSF3Q4G176 576 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-201ENST00000248139 PRR7Q8TB68 274 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 STARD4Q96DR4 205 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 PARD6GQ9BYG4 376 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-201ENST00000248139 RPL23P62829 140 aaKnown RBP21.22■□□□□ 0.99
RAB40C-201ENST00000248139 C1orf229Q6ZS94 237 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-201ENST00000248139 OR51G1Q8NGK1 321 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 M0R1X1 148 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 IGHV2-70P01814 119 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 CENPVQ7Z7K6 275 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-201ENST00000248139 ZNF709Q8N972 641 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 LURAP1Q96LR2 239 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 ZNF71Q9NQZ8 489 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-201ENST00000248139 NAT8Q9UHE5 227 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 GAB2Q9UQC2 676 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 TIMM9Q9Y5J7 89 aa21.22■□□□□ 0.99
RAB40C-201ENST00000248139 TET2Q6N021 2002 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-201ENST00000248139 PRR33A8MZF0 331 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 DUTP33316 252 aaKnown RBP21.21■□□□□ 0.99
RAB40C-201ENST00000248139 PATZ1Q9HBE1 687 aaKnown RBP21.21■□□□□ 0.99
RAB40C-201ENST00000248139 AKAP13Q12802 2813 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 PPP1R2P9O14990 202 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 FABP4P15090 132 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 BSXQ3C1V8 233 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 C9orf152Q5JTZ5 239 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 DUX4L9Q6RFH8 374 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-201ENST00000248139 HIST3H2BBQ8N257 126 aa21.21■□□□□ 0.99
RAB40C-201ENST00000248139 SLC31A2O15432 143 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 SOX15O60248 233 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 GZMHP20718 246 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 SEM1Q6ZVN7 128 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 SDSLQ96GA7 329 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 AQP7O14520 342 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 KBTBD11O94819 623 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 FTH1P19P0C7X4 201 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 NPPCP23582 126 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 S100PP25815 95 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 MEGF10Q96KG7 1140 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 TMEM204Q9BSN7 226 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 ACTR3CQ9C0K3 210 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-201ENST00000248139 OR6C3Q9NZP0 311 aa21.2■□□□□ 0.98
RAB40C-201ENST00000248139 SPRY3O43610 288 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 KALRNO60229 2985 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 ATP6V1FQ16864 119 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 MORN2Q502X0 79 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 FAM209BQ5JX69 171 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 PRAMEF5Q5TYX0 476 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms