RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 SRSF5Q13243 272 aaKnown RBP11.94□□□□□ -0.5
TARDBP-201ENST00000240185 IGHV3-72A0A0B4J1Y9 119 aa11.94□□□□□ -0.5
TARDBP-201ENST00000240185 ATXN7O15265 892 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-201ENST00000240185 GCHFRP30047 84 aa11.94□□□□□ -0.5
TARDBP-201ENST00000240185 ZNF56Q15929 161 aa11.94□□□□□ -0.5
TARDBP-201ENST00000240185 MAJINQ3KP22 176 aa11.94□□□□□ -0.5
TARDBP-201ENST00000240185 ATRAIDQ6UW56 229 aa11.94□□□□□ -0.5
TARDBP-201ENST00000240185 A0A1W2PS18 150 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 GPR183P32249 361 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 PSG9Q00887 426 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 GPBAR1Q8TDU6 330 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 RPRMQ9NS64 109 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 PGPEP1Q9NXJ5 209 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 MYO7AQ13402 2215 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 MC5RP33032 325 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 NABP2Q9BQ15 211 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 IL36BQ9NZH7 164 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 ZNF257Q9Y2Q1 563 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 IGHV3OR16-12A0A075B7B8 117 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 PSMB11A5LHX3 300 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-201ENST00000240185 HSPE1P61604 102 aaKnown RBP11.93□□□□□ -0.5
TARDBP-201ENST00000240185 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 CD200R1LQ6Q8B3 271 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 Q6ZS52 159 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 GLULP15104 373 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 LIMS2Q7Z4I7 341 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 POC1AQ8NBT0 407 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 MS4A5Q9H3V2 200 aa11.93□□□□□ -0.5
TARDBP-201ENST00000240185 ATP5LO75964 103 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 OR5AN1Q8NGI8 311 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 NRTNQ99748 197 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 C19orf24Q9BVV8 132 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 ZNF708P17019 499 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 SOX8P57073 446 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 C1orf100Q5SVJ3 147 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 PSMG3Q9BT73 122 aaPredicted RBP11.92□□□□□ -0.5
TARDBP-201ENST00000240185 NPFFR1Q9GZQ6 430 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 SLC25A53Q5H9E4 307 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
TARDBP-201ENST00000240185 ZNF385AQ96PM9 386 aaKnown RBP11.92□□□□□ -0.5
TARDBP-201ENST00000240185 NHP2Q9NX24 153 aaKnown RBP11.92□□□□□ -0.5
TARDBP-201ENST00000240185 GPX1P07203 203 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 SFTPCP11686 197 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 MAGEA5P43359 124 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 SMIM8Q96KF7 97 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 FAM117AQ9C073 453 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 ELOVL5Q9NYP7 299 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 LAMA4Q16363 1823 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 MARCH11A6NNE9 402 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 OR2H2O95918 312 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 CD8AP01732 235 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 MPV17P39210 176 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 PSMG4Q5JS54 123 aa11.92□□□□□ -0.5
TARDBP-201ENST00000240185 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 INO80CQ6PI98 192 aaPredicted RBP11.91□□□□□ -0.5
TARDBP-201ENST00000240185 MDP1Q86V88 176 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 MBD1Q9UIS9 605 aaPredicted RBP11.91□□□□□ -0.5
TARDBP-201ENST00000240185 PPIAL4EA0A075B759 164 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 TMEM262E9PQX1 116 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 PPIAL4FP0DN26 164 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 PPIAL4AQ9Y536 164 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 C4AP0C0L4 1744 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 C4BP0C0L5 1744 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 SNRNP200O75643 2136 aaKnown RBP11.91□□□□□ -0.5
TARDBP-201ENST00000240185 CENPVL1A0A0U1RR11 272 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 SNAI3Q3KNW1 292 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 FAM27BQ5VT28 67 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 ABHD12Q8N2K0 398 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 TIMP4Q99727 224 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 SFXN3Q9BWM7 321 aa11.91□□□□□ -0.5
TARDBP-201ENST00000240185 WNT9BO14905 357 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 SRP19P09132 144 aaKnown RBP11.9□□□□□ -0.5
TARDBP-201ENST00000240185 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
TARDBP-201ENST00000240185 NRN1Q9NPD7 142 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 AMELYQ99218 206 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 CCL13Q99616 98 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 CCL3P10147 92 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 TMEM187Q14656 261 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 COX14Q96I36 57 aa11.9□□□□□ -0.5
TARDBP-201ENST00000240185 PGPEP1LA6NFU8 196 aa11.9□□□□□ -0.51
TARDBP-201ENST00000240185 SERF1AO75920 110 aa11.9□□□□□ -0.51
TARDBP-201ENST00000240185 MFAP4P55083 255 aa11.9□□□□□ -0.51
TARDBP-201ENST00000240185 FBXW9Q5XUX1 488 aa11.9□□□□□ -0.51
TARDBP-201ENST00000240185 FADS6Q8N9I5 356 aa11.9□□□□□ -0.51
TARDBP-201ENST00000240185 SSBP4Q9BWG4 385 aaPredicted RBP11.9□□□□□ -0.51
TARDBP-201ENST00000240185 A0A087WWC5 75 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 A0A1W2PRS3 328 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 GATAD1Q8WUU5 269 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 TCF19Q9Y242 345 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
TARDBP-201ENST00000240185 TRBV7-9A0A0J9YWB2 115 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 CELA2BP08218 269 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms