RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CST7O76096 145 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 IGHV3-7P01780 117 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 IGHV4-39P01824 125 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 DYNLT3P51808 116 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 ABHD14AQ9BUJ0 271 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 IDI2-AS1Q9NZ38 188 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 FASNP49327 2511 aaKnown RBP18.57■□□□□ 0.56
CDX1-201ENST00000231656 CSMD2Q7Z408 3487 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 RAB19A4D1S5 217 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 RAB7AP51149 207 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 CLINT1Q14677 625 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 TMEM30BQ3MIR4 351 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 CT45A1Q5HYN5 189 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 ZNF787Q6DD87 383 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 OR5C1Q8NGR4 320 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 CT45A3Q8NHU0 189 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 CD300LFQ8TDQ1 290 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 LEAP2Q969E1 77 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 ASH1LQ9NR48 2969 aaKnown RBP18.56■□□□□ 0.56
CDX1-201ENST00000231656 ABCA12Q86UK0 2595 aa18.56■□□□□ 0.56
CDX1-201ENST00000231656 M0R1X1 148 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 RAB29O14966 203 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 NDUFB7P17568 137 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 ZNF266Q14584 549 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 RPL39P5Q59GN2 51 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 PXDC1Q5TGL8 231 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 ZNF439Q8NDP4 499 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 MMP26Q9NRE1 261 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 LINC00312Q9Y6C7 94 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 hADV38S2A0JD32 116 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 H3BP45 60 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 NDUFB3O43676 98 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 LRRC10Q5BKY1 277 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 ZNF525Q8N782 197 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 SH3BGRL3Q9H299 93 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 HSPB7Q9UBY9 170 aa18.55■□□□□ 0.56
CDX1-201ENST00000231656 NBPF19A0A087WUL8 3843 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 NUDT19A8MXV4 375 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 DVL1O14640 695 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 IAPPP10997 89 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 SULT1A1P50225 295 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 TAS2R30P59541 319 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 MEF2CQ06413 473 aaPredicted RBP18.54■□□□□ 0.56
CDX1-201ENST00000231656 TNFRSF9Q07011 255 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 TMEM155Q4W5P6 130 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 UQCC3Q6UW78 93 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 C1orf229Q6ZS94 237 aaPredicted RBP18.54■□□□□ 0.56
CDX1-201ENST00000231656 HSD17B11Q8NBQ5 300 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 PARP11Q9NR21 331 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 C19orf12Q9NSK7 152 aa18.54■□□□□ 0.56
CDX1-201ENST00000231656 MMP23AO75900 390 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 GPR6P46095 362 aaPredicted RBP18.53■□□□□ 0.56
CDX1-201ENST00000231656 BLOC1S1P78537 153 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 STX12Q86Y82 276 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 TMEM217Q8N7C4 229 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.53■□□□□ 0.56
CDX1-201ENST00000231656 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.53■□□□□ 0.56
CDX1-201ENST00000231656 PSENENQ9NZ42 101 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 YLPM1P49750 1951 aaKnown RBP18.53■□□□□ 0.56
CDX1-201ENST00000231656 POLQO75417 2590 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 A0A1W2PPE3 182 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 RBFOX2O43251 390 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDX1-201ENST00000231656 KRTAP10-9P60411 292 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 UBE2KP61086 200 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 TMEM267Q0VDI3 215 aaPredicted RBP18.53■□□□□ 0.56
CDX1-201ENST00000231656 ZNF273Q14593 569 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 TUSC1Q2TAM9 212 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 PRAMEF5Q5TYX0 476 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 BTNL8Q6UX41 500 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 IL34Q6ZMJ4 242 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 BPIFCQ8NFQ6 507 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 RBKSQ9H477 322 aa18.53■□□□□ 0.56
CDX1-201ENST00000231656 RPUSD1Q9UJJ7 312 aaKnown RBP18.53■□□□□ 0.56
CDX1-201ENST00000231656 MALRD1Q5VYJ5 2156 aa18.52■□□□□ 0.56
CDX1-201ENST00000231656 ANKRD17O75179 2603 aaKnown RBP18.52■□□□□ 0.56
CDX1-201ENST00000231656 FCGR3BO75015 233 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 NFYBP25208 207 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 H2BFWTQ7Z2G1 175 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 STPG2Q8N412 459 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 DDB2Q92466 427 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 R3HDM4Q96D70 268 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 ATP5SQ99766 215 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 ZNF251Q9BRH9 671 aa18.52■□□□□ 0.55
CDX1-201ENST00000231656 SAA2-SAA4A0A096LPE2 208 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 MARCH11A6NNE9 402 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 HPRT1P00492 218 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 SAA2P0DJI9 122 aaPredicted RBP18.51■□□□□ 0.55
CDX1-201ENST00000231656 ATP5J2P56134 94 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 RPL31P62899 125 aaKnown RBP18.51■□□□□ 0.55
CDX1-201ENST00000231656 PJVKQ0ZLH3 352 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 HIST2H2BCQ6DN03 193 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 ZNF841Q6ZN19 808 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 Q6ZRG5 221 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 HRH4Q9H3N8 390 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 MIOXQ9UGB7 285 aa18.51■□□□□ 0.55
CDX1-201ENST00000231656 VPS13CQ709C8 3753 aa18.5■□□□□ 0.55
CDX1-201ENST00000231656 ATP6V0CP27449 155 aa18.5■□□□□ 0.55
CDX1-201ENST00000231656 OR10A7Q8NGE5 316 aa18.5■□□□□ 0.55
CDX1-201ENST00000231656 LYPD6BQ8NI32 183 aa18.5■□□□□ 0.55
CDX1-201ENST00000231656 CACFD1Q9UGQ2 172 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms