RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RBPJQ06330 500 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 ZNF726P1Q15940 193 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 VWC2Q2TAL6 325 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 TMEM30BQ3MIR4 351 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 LILRB2Q8N423 598 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 SCGB1C1Q8TD33 95 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 MBD3L1Q8WWY6 194 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 RND1Q92730 232 aa15.78■□□□□ 0.12
YBX3-201ENST00000228251 TAF15Q92804 592 aaKnown RBP eCLIP15.78■□□□□ 0.12
YBX3-201ENST00000228251 CIB3Q96Q77 187 aaPredicted RBP15.78■□□□□ 0.12
YBX3-201ENST00000228251 SHISA9B4DS77 424 aa15.77■□□□□ 0.12
YBX3-201ENST00000228251 TNFRSF13BO14836 293 aaPredicted RBP15.77■□□□□ 0.12
YBX3-201ENST00000228251 ATXN7O15265 892 aaPredicted RBP15.77■□□□□ 0.12
YBX3-201ENST00000228251 MDKP21741 143 aaPredicted RBP15.77■□□□□ 0.12
YBX3-201ENST00000228251 ATP6V1FQ16864 119 aa15.77■□□□□ 0.12
YBX3-201ENST00000228251 QTRT1Q9BXR0 403 aaKnown RBP15.77■□□□□ 0.12
YBX3-201ENST00000228251 VSIRQ9H7M9 311 aa15.77■□□□□ 0.12
YBX3-201ENST00000228251 IDI2-AS1Q9NZ38 188 aa15.77■□□□□ 0.12
YBX3-201ENST00000228251 TIMM9Q9Y5J7 89 aa15.77■□□□□ 0.12
YBX3-201ENST00000228251 ADGRG4Q8IZF6 3080 aa15.77■□□□□ 0.12
YBX3-201ENST00000228251 IGHV3-7P01780 117 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 HBE1P02100 147 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 IRF2P14316 349 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 KIR2DS2P43631 304 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 ZNF506Q5JVG8 444 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 ADAM5Q6NVV9 412 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 ZCCHC24Q8N2G6 241 aaKnown RBP15.77■□□□□ 0.11
YBX3-201ENST00000228251 CLDND2Q8NHS1 167 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 LEAP2Q969E1 77 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 NDRG3Q9UGV2 375 aa15.77■□□□□ 0.11
YBX3-201ENST00000228251 SAA2-SAA4A0A096LPE2 208 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 ARG1P05089 322 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 SAA2P0DJI9 122 aaPredicted RBP15.76■□□□□ 0.11
YBX3-201ENST00000228251 ICAM4Q14773 271 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 NCMAPQ5T1S8 102 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 SLC25A24Q6NUK1 477 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 OR52E5Q8NH55 327 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 SFT2D1Q8WV19 159 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 RBMXL1Q96E39 390 aaKnown RBP15.76■□□□□ 0.11
YBX3-201ENST00000228251 RPUSD1Q9UJJ7 312 aaKnown RBP15.76■□□□□ 0.11
YBX3-201ENST00000228251 ARFGEF3Q5TH69 2177 aa15.76■□□□□ 0.11
YBX3-201ENST00000228251 C15orf62A8K5M9 175 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 MMP23AO75900 390 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 SRP19P09132 144 aaKnown RBP15.75■□□□□ 0.11
YBX3-201ENST00000228251 PAX6P26367 422 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 GNB2P62879 340 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 POLEQ07864 2286 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 OR8G2PQ6IF36 304 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 SSX7Q7RTT5 188 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 TMEM147Q9BVK8 224 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 ROS1P08922 2347 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 UBE2L5PA0A1B0GUS4 154 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 E7EQL1 145 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 TMEM178BH3BS89 294 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 UCNP55089 124 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 RELBQ01201 579 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 TLE1Q04724 770 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 ETV3LQ6ZN32 361 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 RCC1LQ96I51 464 aaKnown RBP15.75■□□□□ 0.11
YBX3-201ENST00000228251 AIFM2Q9BRQ8 373 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 PRELID3BQ9Y3B1 194 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 LINC00312Q9Y6C7 94 aa15.75■□□□□ 0.11
YBX3-201ENST00000228251 SMG1Q96Q15 3661 aaKnown RBP15.75■□□□□ 0.11
YBX3-201ENST00000228251 YLPM1P49750 1951 aaKnown RBP15.74■□□□□ 0.11
YBX3-201ENST00000228251 A0A1W2PPE3 182 aa15.74■□□□□ 0.11
YBX3-201ENST00000228251 SCAF4O95104 1147 aaKnown RBP15.74■□□□□ 0.11
YBX3-201ENST00000228251 LY86O95711 162 aa15.74■□□□□ 0.11
YBX3-201ENST00000228251 NQO2P16083 231 aa15.74■□□□□ 0.11
YBX3-201ENST00000228251 TMEM41BQ5BJD5 291 aa15.74■□□□□ 0.11
YBX3-201ENST00000228251 SLC25A48Q6ZT89 311 aaKnown RBP15.74■□□□□ 0.11
YBX3-201ENST00000228251 RNASE6Q93091 150 aaKnown RBP15.74■□□□□ 0.11
YBX3-201ENST00000228251 S1PR3Q99500 378 aa15.74■□□□□ 0.11
YBX3-201ENST00000228251 KALRNO60229 2985 aa15.74■□□□□ 0.11
YBX3-201ENST00000228251 TRAV38-1A0A0B4J264 116 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 HSPB1P04792 205 aaKnown RBP15.73■□□□□ 0.11
YBX3-201ENST00000228251 VDAC2P45880 294 aaPredicted RBP15.73■□□□□ 0.11
YBX3-201ENST00000228251 THBS3P49746 956 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 OR2B8PP59922 312 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 SPCS3P61009 180 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 MEF2CQ06413 473 aaPredicted RBP15.73■□□□□ 0.11
YBX3-201ENST00000228251 POU2AF1Q16633 256 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 AWAT1Q58HT5 328 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 PRAMEF5Q5TYX0 476 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 ZNF383Q8NA42 475 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 OR4S2Q8NH73 311 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 PINX1Q96BK5 328 aaKnown RBP15.73■□□□□ 0.11
YBX3-201ENST00000228251 SAP30LQ9HAJ7 183 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 NGBQ9NPG2 151 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 IGF2RP11717 2491 aa15.73■□□□□ 0.11
YBX3-201ENST00000228251 TRAV3A0A0B4J244 114 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 LOC102723971A0A1B0GUV8 181 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 NKX6-3A6NJ46 265 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 CEBPZOSA8MTT3 80 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 IGKV1D-33P01593 117 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 IGKV1-33P01594 117 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 PMS2P11Q13670 270 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 FBXL19-AS1Q494R0 122 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 SPINK9Q5DT21 86 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 ZNF429Q86V71 674 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 OR10A7Q8NGE5 316 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms