RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 PCSK4Q6UW60 755 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
EXTL3-201ENST00000220562 IGKV3D-11A0A0A0MRZ8 115 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 H3BTX0 84 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 IGKV3-11P04433 115 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 PRSS8Q16651 343 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 FAM209AQ5JX71 171 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 NEU1Q99519 415 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 TMEM187Q14656 261 aa15.29■□□□□ 0.04
EXTL3-201ENST00000220562 QTRT1Q9BXR0 403 aaKnown RBP15.29■□□□□ 0.04
EXTL3-201ENST00000220562 SP9P0CG40 484 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 HSPE1P61604 102 aaKnown RBP15.28■□□□□ 0.04
EXTL3-201ENST00000220562 CD200R1LQ6Q8B3 271 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 PHLDA3Q9Y5J5 127 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 NDUFA2O43678 99 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 ARF6P62330 175 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 OR4B1Q8NGF8 309 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 COL5A1-AS1Q5SY13 56 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 MAP1LC3AQ9H492 121 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 COL4A5P29400 1685 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 LOC105371242A0A075B767 164 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 FAM90A26D6RGX4 464 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 NPIPB6E9PJ23 425 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 UNQ9370/PRO34162Q6UXP9 181 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 TRIP12Q14669 1992 aaPredicted RBP15.28■□□□□ 0.04
EXTL3-201ENST00000220562 PCM1Q15154 2024 aa15.28■□□□□ 0.04
EXTL3-201ENST00000220562 C2orf83Q53S99 150 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 TXNDC17Q9BRA2 123 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 CACNA1CQ13936 2221 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 TRAV30A0A087WSZ9 112 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 H2BFSP57053 126 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 RPS11P62280 158 aaKnown RBP eCLIP15.27■□□□□ 0.04
EXTL3-201ENST00000220562 SMUG1Q53HV7 270 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 FOXJ2Q9P0K8 574 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 RNF115Q9Y4L5 304 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 CRYBB3P26998 211 aa15.27■□□□□ 0.04
EXTL3-201ENST00000220562 TMEM238LA0A1B0GVL6 79 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 A6NJY4 79 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 OTX1P32242 354 aaPredicted RBP15.27■□□□□ 0.03
EXTL3-201ENST00000220562 ABLIM2Q6H8Q1 611 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 SRSF12Q8WXF0 261 aaKnown RBP15.27■□□□□ 0.03
EXTL3-201ENST00000220562 STRCP1A6NGW2 1772 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 C8orf88P0DMB2 117 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 ZNF385CQ66K41 422 aaPredicted RBP15.27■□□□□ 0.03
EXTL3-201ENST00000220562 DDB2Q92466 427 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 SGK494Q96LW2 274 aa15.27■□□□□ 0.03
EXTL3-201ENST00000220562 A0A1W2PQM1 296 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 C17orf51A8MQB3 221 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 HLA-DQA1P01909 254 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 HOXB1P14653 301 aaPredicted RBP15.26■□□□□ 0.03
EXTL3-201ENST00000220562 DUX5Q96PT3 197 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 IGHV3OR16-10A0A075B7F0 116 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 IFI6P09912 130 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 RND3P61587 244 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 PEAR1Q5VY43 1037 aaPredicted RBP15.26■□□□□ 0.03
EXTL3-201ENST00000220562 NPDC1Q9NQX5 325 aaPredicted RBP15.26■□□□□ 0.03
EXTL3-201ENST00000220562 COL11A1P12107 1806 aaPredicted RBP15.26■□□□□ 0.03
EXTL3-201ENST00000220562 THY1P04216 161 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 COX5BP10606 129 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 LOC107984156A0A0G2JMH3 177 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 HAX1O00165 279 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 DLX6P56179 175 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 ASPHD2Q6ICH7 369 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 ARL17AQ8IVW1 177 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 OR5P3Q8WZ94 311 aa15.26■□□□□ 0.03
EXTL3-201ENST00000220562 IGHV1-69-2A0A0G2JMI3 117 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 GCGP01275 180 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 CRYBA2P53672 197 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 CTHRC1Q96CG8 243 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 LEPROTL1O95214 131 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 CFDP00746 253 aaPredicted RBP15.25■□□□□ 0.03
EXTL3-201ENST00000220562 RPS20P60866 119 aaKnown RBP15.25■□□□□ 0.03
EXTL3-201ENST00000220562 COL25A1Q9BXS0 654 aaPredicted RBP15.25■□□□□ 0.03
EXTL3-201ENST00000220562 TMEM74BQ9NUR3 256 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 ZNF256Q9Y2P7 627 aaPredicted RBP15.25■□□□□ 0.03
EXTL3-201ENST00000220562 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 TIAF1O95411 115 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 FAM106AQ4KMX7 169 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 SMIM8Q96KF7 97 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 SFXN3Q9BWM7 321 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 PTGDSP41222 190 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 PNKDQ8N490 385 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 OR4C13Q8NGP0 309 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 CCL19Q99731 98 aa15.25■□□□□ 0.03
EXTL3-201ENST00000220562 ZNF729A6NN14 1252 aaPredicted RBP15.24■□□□□ 0.03
EXTL3-201ENST00000220562 IGHV3-48P01763 117 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 AGAP20933 346 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 ZNF146Q15072 292 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 C21orf62-AS1Q17RA5 79 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 OR9G1Q8NH87 305 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 SPSB4Q96A44 273 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 RAXQ9Y2V3 346 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 EGR4Q05215 589 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 RAX2Q96IS3 184 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 CLEC7AQ9BXN2 247 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
EXTL3-201ENST00000220562 FAM181BA6NEQ2 426 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 RNASE1P07998 156 aaKnown RBP15.24■□□□□ 0.03
EXTL3-201ENST00000220562 LAMTOR1Q6IAA8 161 aa15.24■□□□□ 0.03
EXTL3-201ENST00000220562 HIST1H4GQ99525 98 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms