RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 TET2Q6N021 2002 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 SAA2-SAA4A0A096LPE2 208 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 TRGV8A0A0C4DH27 118 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 SAA2P0DJI9 122 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 LRRC75BQ2VPJ9 315 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 CT45A1Q5HYN5 189 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 CT45A3Q8NHU0 189 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 NEUROG1Q92886 237 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 AIFM2Q9BRQ8 373 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 RPRMQ9NS64 109 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 ATRXP46100 2492 aa6.59□□□□□ -1.35
HMGXB4-201ENST00000216106 RBFOX3A6NFN3 312 aa6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 PPIHO43447 177 aaKnown RBP6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 MMP23AO75900 390 aa6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 HPRT1P00492 218 aa6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 NDUFB7P17568 137 aa6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 ELLP55199 621 aaPredicted RBP6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 PRAMEF5Q5TYX0 476 aa6.59□□□□□ -1.36
HMGXB4-201ENST00000216106 NBASA2RRP1 2371 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 EIF3GO75821 320 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 CEBPGP53567 150 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 ERVFRD-1P60508 538 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 AWAT1Q58HT5 328 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 TEX36Q5VZQ5 186 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 LYG1Q8N1E2 194 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 TAF15Q92804 592 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 S1PR3Q99500 378 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 KIAA1456Q9P272 454 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 M0R036 132 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 IFNA17P01571 189 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 RAB7AP51149 207 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 CCL17Q92583 94 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 PSMG3Q9BT73 122 aaPredicted RBP6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNRD1Q9P1U0 126 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 PRELID3BQ9Y3B1 194 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 BTBD17A6NE02 478 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 PMS2P5A8MQ11 134 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 PLA2G5P39877 138 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 HFEQ30201 348 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 LCN15Q6UWW0 184 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 DPPA3Q6W0C5 159 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 NCOR1P1Q9H4R4 102 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 RPS10P5Q9NQ39 176 aa6.58□□□□□ -1.36
HMGXB4-201ENST00000216106 ARFGEF3Q5TH69 2177 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 TRAV3A0A0B4J244 114 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 SNRNP70P08621 437 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 FBP1P09467 338 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 FGF8P55075 233 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF726P1Q15940 193 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 SP5Q6BEB4 398 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 OR10P1Q8NGE3 313 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 OR4A16Q8NH70 328 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 FAM216AQ8WUB2 273 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 CIB3Q96Q77 187 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 DIRC2Q96SL1 478 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 VKORC1Q9BQB6 163 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 RAB9BQ9NP90 201 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 IDI2-AS1Q9NZ38 188 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 A0A1B0GW64 132 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 NKX6-3A6NJ46 265 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 SHISA9B4DS77 424 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ERVK-16P61578 105 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 DCHS2Q6V1P9 2916 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 DMRTC2Q8IXT2 367 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 RXFP4Q8TDU9 374 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 DDB2Q92466 427 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 TMEM140Q9NV12 185 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 SLC25A10Q9UBX3 287 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 TRAV38-1A0A0B4J264 116 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF729A6NN14 1252 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 HBE1P02100 147 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 NQO2P16083 231 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 RAB2AP61019 212 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ICAM4Q14773 271 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 SOHLH1Q5JUK2 328 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF439Q8NDP4 499 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 CLDND2Q8NHS1 167 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 RCC1LQ96I51 464 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF251Q9BRH9 671 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 EGLN1Q9GZT9 426 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
HMGXB4-201ENST00000216106 ZFP92A6NM28 416 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 FAM90A27PA6NNH2 459 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 E7EQL1 145 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 RBFOX2O43251 390 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 FCN3O75636 299 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 SCAF4O95104 1147 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 OR8U8P0C7N1 319 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 DAOP14920 347 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 MRPS11P82912 194 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 SERF2P84101 59 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 TFF3Q07654 80 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF787Q6DD87 383 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 OR4S2Q8NH73 311 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 RNASE6Q93091 150 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PINX1Q96BK5 328 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms