RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Rpp14Q9CQH8 122 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 MmachcQ9CZD0 279 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Mdp1Q9D967 164 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Q9DAL9 119 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Vstm2bQ9JME9 285 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rps2-ps6A0A140T8L5 221 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 1700031F05RikB1AX30 191 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 SiglechB7ZMQ6 332 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 P2rx6O54803 389 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 IfngP01580 155 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 C2cd4dP0CG09 341 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Il10P18893 178 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Hspb6Q5EBG6 162 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 NppcQ61839 126 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Foxb1Q64732 325 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 AdoQ6PDY2 256 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Stoml3Q6PE84 287 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr782Q7TRI2 314 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr305Q7TS02 319 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 AtcayQ8BHE3 372 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Hspa12aQ8K0U4 675 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Tm7sf3Q9CRG1 565 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Tstd3Q9D0B5 157 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm9817Q9D2M0 144 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Siglec15A7E1W8 342 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 RnlsA7RDN6 342 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Vmn2r60L7N2A1 853 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Pitx3O35160 302 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Csf3P09920 208 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 NdnP25233 325 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 PkibQ04758 92 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 PcolceQ61398 468 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 PnlipQ6P8U6 465 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Arl14epQ8BIX3 276 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Prss27Q8BJR6 328 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gltpd2Q8K0R6 321 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr114Q923Q8 312 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Plekha2Q9ERS5 425 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Angpt4Q9WVH6 509 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm13769A2ATW2 309 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr555E9Q547 315 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ifna2P01573 190 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Hbb-yP02104 147 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 AregP31955 248 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Nkx2-1P50220 372 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rab1AP62821 205 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Il9rQ01114 468 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm2016Q3TQZ4 144 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Psg19Q4KL31 475 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm12253Q5NC48 229 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Adat3Q6PAT0 349 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cd200r4Q6XJV4 270 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 SowahbQ8BZW2 760 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 BC049762Q8C601 163 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1368Q8VFG3 314 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1298Q8VGE6 312 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1257Q8VGP0 309 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Klf7Q99JB0 301 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gabrg1Q9R0Y8 465 aa11.14□□□□□ -0.63
Nup88-203ENSMUST00000108531 Espl1P60330 2118 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ighv1-67A0A0G2JFN9 117 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm12790B1AUV6 201 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Zfp942B8JJA7 486 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm3676D3Z236 184 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 ElnP54320 860 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Pcbd1P61458 104 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Polr2gP62488 172 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 PilraQ2YFS3 302 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Eif4e1bQ3UTA9 244 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 NmsQ5H8A1 153 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Epha5Q60629 876 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tmem251Q8BH26 163 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Mr1Q8HWB0 341 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr339Q8VGK8 309 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tspan2Q922J6 221 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tmem107Q9CPV0 140 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cst6Q9D1B1 149 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 9130008F23RikQ9D2Z6 181 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ntn3Q9R1A3 580 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Psmb3Q9R1P1 205 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr204E9Q8M0 305 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm21972J3QN38 98 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 PrkacaP05132 351 aaKnown RBP11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 BlkP16277 499 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cdx2P43241 311 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 S100a3P62818 101 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Smad4P97471 551 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Sft2d1Q5SSN7 159 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1341Q7TQV4 312 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 FarsaQ8C0C7 508 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Zim1Q8C393 579 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1240Q8VG73 314 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Bcdin3dQ91YP1 285 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Borcs8Q9D6Y4 120 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tmem54Q9D7S1 219 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rhebl1Q9D8T3 184 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Smdt1Q9DB10 107 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Mmp1aQ9EPL5 464 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Prss8Q9ESD1 342 aa11.13□□□□□ -0.63
Nup88-203ENSMUST00000108531 Wnk2Q3UH66 2149 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms