RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 CcnjQ3TZI6 379 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Aimp2Q8R010 320 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr360Q8VFP3 317 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Pnpla3Q91WW7 413 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 MynnQ99MD8 610 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Smim3Q99PE5 60 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Mettl21AQ9CQL0 218 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr945Q9EQB5 319 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cml5Q9QXS8 227 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Fzr1Q9R1K5 493 aa19.2■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Igkv4-50A0A0B4J1J0 117 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Amy2a1E9PV85 245 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm6665F6Y363 85 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Slc38a6G3UVW3 457 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm21863J3KMP8 111 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr224M9MMJ7 314 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 CfdP03953 259 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Aqp2P56402 271 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ca10P61215 328 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Znf691Q3TDE8 283 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm11232Q5SPI8 295 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gnb3Q61011 340 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Vamp1Q62442 118 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Rnf144bQ8BKD6 301 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Slc17a5Q8BN82 495 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cd200r5Q8BTP3 270 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Esco2Q8CIB9 592 aaKnown RBP19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Vmn1r4Q8R2D3 297 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr669Q8VGU9 317 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Iqcf5Q9DAL7 148 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm45808A0A1B0GSH8 263 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Prdm13E9PZZ1 754 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Lbhd2G3UW55 114 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Vmn1r204I7HIK1 302 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm20918J3QN17 227 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 MosP00536 390 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Csf3P09920 208 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 AhsgP29699 345 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Htr2aP35363 471 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Pax8Q00288 457 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ctxn2Q3URE8 81 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Sat2Q6P8J2 170 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Zfp947Q8BIQ6 437 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Vmn1r73Q8R293 303 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr134Q8VG95 312 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr992Q8VGC6 309 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Dph7Q9CYU6 477 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Csmd2V9GX34 3611 aa19.19■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm21488A0A087WR99 222 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm21497A0A087WRK3 222 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm29866A0A0A6YX04 222 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Trav12-1A0N8R1 115 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ube2ql1A0PJN4 161 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 A630073D07RikE9PWS6 100 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cpsf4lE9Q2N0 280 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cxcl13O55038 109 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cox6a1P43024 111 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tas2r41P59532 308 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Rnft2Q3UF64 445 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Glt8d1Q6NSU3 371 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cxxc4Q6NXI8 198 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 PnlipQ6P8U6 465 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr94Q6UAH0 386 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr876Q7TRE4 310 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Bdh1Q80XN0 343 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 JkampQ8BI36 311 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Znf436Q8BPP0 452 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tssk5Q8C1R0 372 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ubqln3Q8C5U9 658 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Q8WUR0 141 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Slc22a26Q91WJ2 552 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tmem218Q9CQ44 115 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Teddm3Q9CQH1 294 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ndufb8Q9D6J5 186 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Sp5Q9JHX2 398 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Calm4Q9JM83 148 aa19.18■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr1496B9EHG2 317 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Vmn2r108E9PYS0 855 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm21818J3KMS6 170 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Mrpl23O35972 146 aaKnown RBP19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 CcnkO88874 554 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Rps23P62267 143 aaKnown RBP19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Q6DIA7 600 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Q8BTC1 67 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr1270Q8VGP3 304 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Fam3bQ9D309 235 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Il36bQ9D6Z6 183 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ccnl2Q9JJA7 518 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 LitafQ9JLJ0 161 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Naa10Q9QY36 235 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Syt7Q9R0N7 403 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Timm8a1Q9WVA2 97 aa19.17■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tmem156A0A1D5RLR8 321 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Hspb1P14602 209 aaKnown RBP19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 P18526 117 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Sec61a1P61620 476 aaKnown RBP19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Cd96Q3U0X8 602 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Taar9Q5QD04 348 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 PnkdQ69ZP3 385 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Zfp729bQ80VN4 1045 aa19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms