RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 TrdcA0A0G2JEU3 153 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Stpg3A2RSX4 306 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Aadacl4B1AVU5 407 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pi4kaE9Q3L2 2105 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem167bQ80X45 74 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pqlc2Q8C4N4 293 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Plet1Q8VEN2 237 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 CtsjQ9R014 334 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 SktA2AQ25 1946 aaKnown RBP10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 HpnO35453 436 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 TcapO70548 167 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Emp2O88662 172 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 B2mP01887 119 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ear2P97425 156 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Lclat1Q3UN02 376 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 RhofQ8BYP3 211 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr802Q8VGJ2 312 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm15440D3Z3P4 90 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Foxb1Q64732 325 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rpp21Q8R040 150 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tm4sf4Q91XD3 202 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Josd1Q9DBJ6 202 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Btnl10Q9JK39 275 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm436B1AVU6 407 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Sult2a5K7N6K9 285 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gdf1P20863 357 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 MplQ08351 625 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Scand1Q2M4I6 142 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ldlrad2Q3V0V0 142 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 C030005K15RikQ8BQN9 115 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 GmppaQ922H4 420 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ufc1Q9CR09 167 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Mdp1Q9D967 164 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 HgfacQ9R098 653 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Bcl2l15Q08ED0 167 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm21943Q5FWD5 227 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ino80cQ8BHA0 191 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem38bQ9DAV9 292 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm45753A0A1C7CYU8 86 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 A630095N17RikJ3KMM7 116 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm8653K9J7G2 307 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Vmn1r117L7N2C9 307 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rab33bO35963 229 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Il11ra1Q64385 432 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1341Q7TQV4 312 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1462Q8VFW3 307 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Lamtor1Q9CQ22 161 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pdlim5Q8CI51 591 aaKnown RBP10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Vmn1r178Q8R2B6 304 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem242Q8VCR3 140 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 GpnmbQ99P91 574 aa10.64□□□□□ -0.71
Trim56-201ENSMUST00000054384 Psg20E9Q9B4 475 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Apobec1P51908 229 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ybx1P62960 322 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem207P86045 143 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 ArsgQ3TYD4 525 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Skp2Q9Z0Z3 424 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Scml2B1AVB3 969 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Prr23a2D3YWX5 253 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Mdh2P08249 338 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Slc39a7Q31125 476 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm12728V9GX31 77 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ighv5-15A0A0A6YWC7 117 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pusl1A2ADA5 291 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Zfp972A2AW65 139 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Foxd2O35392 492 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 H1fooQ8VIK3 304 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Derl3Q9D8K3 228 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Foxe3Q9QY14 288 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 4930467E23RikD3Z1P8 350 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm15319E9Q637 350 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 G530012D18RikJ3QK25 139 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20918J3QN17 227 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Igsf6P0C6B7 237 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rom1P32958 351 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm21119Q8C646 350 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 TecrQ9CY27 308 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cml3Q9JIY8 226 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm12117V9GXK0 151 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Birc7A2AWP0 285 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 MfngO09008 321 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 1700009N14RikQ14AA6 216 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr5Q60889 312 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Il31Q6EAL8 163 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Prr11Q8BHE0 368 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Stbd1Q8C7E7 338 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 DutQ8VCG1 200 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr654Q8VF27 341 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 IcaQ9DBD0 700 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rbbp6P97868 1790 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 PlauP06869 433 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 S100a4P07091 101 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Nanos3P60324 178 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Aqp11Q8BHH1 271 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ociad1Q9CRD0 247 aaKnown RBP10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ascl3Q9JJR7 174 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm28285A0A087WQ54 102 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 A0A286YCH8 300 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 3110040M04RikA0A286YDK0 300 aa10.63□□□□□ -0.71
Trim56-201ENSMUST00000054384 A0A286YE43 300 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms