RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 CrpP14847 225 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Zfp52Q8BJ45 724 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 C030005K15RikQ8BQN9 115 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1413Q8VGU3 323 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr750E9Q0Z1 331 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Smlr1J3QMJ4 66 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 S1pr2P52592 352 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gabra1P62812 455 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Spred1Q924S8 444 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Nkain1Q9D035 207 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Actl6aQ9Z2N8 429 aaKnown RBP12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr746E9Q840 314 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm5571P01639 130 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Scd2P13011 358 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tnfsf18Q7TS55 173 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tnrc6cQ3UHC0 1690 aaKnown RBP12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cryba1P02525 198 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Thbs3Q05895 956 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gpr4Q8BUD0 365 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cacna1eQ61290 2272 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 RimklaQ6PFX8 380 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Rps21Q9CQR2 83 aaKnown RBP12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm13285B1AYI3 182 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm13275B1AYI8 182 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Zfp59P16373 634 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Etv2P41163 335 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ewsr1Q61545 655 aaKnown RBP12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 IfnzQ8BQT1 182 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Csnk1g2Q8BVP5 415 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm13278Q8CD73 182 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tmem242Q8VCR3 140 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Sfxn4Q925N1 313 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ube2v2Q9D2M8 145 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ighv1-78A0A0G2JGN3 117 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Pira2F8VQ94 680 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ankrd33bQ3U0L2 486 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Sys1Q78S06 156 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1014Q7TR95 305 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1013Q7TR96 305 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Fbxo4Q8CHQ0 385 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr123Q8VFQ1 309 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tspan31Q9CQ88 210 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ethe1Q9DCM0 254 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r41Q9EQ44 310 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm28285A0A087WQ54 102 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Igkv17-121A0A0G2JFA8 117 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr175-ps1A0A140T8K4 308 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ren1P06281 402 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1281Q7TQY6 305 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm11541Q8C4D8 108 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ascl3Q9JJR7 174 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vax2Q9WTP9 292 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Sfrp5Q9WU66 314 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 mt-Co3P00416 261 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gpr3P35413 330 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Masp1P98064 704 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Defb25Q30KN8 71 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tmem211Q3UUA0 195 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1204Q7TR10 309 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Glipr2Q9CYL5 154 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Birc7A2AWP0 285 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tmem262D3Z338 116 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 MybphlQ5FW53 355 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cyb561a3Q6P1H1 242 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Lhfpl2Q8BGA2 222 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r237Q8R296 289 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tmem33Q9CR67 247 aa12.47□□□□□ -0.41
Col5a1-201ENSMUST00000028280 P04213 122 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm12887B1AVM1 119 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Defa4P28311 92 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tgif1P70284 272 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Q497N7 227 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Taar5Q5QD14 337 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Zfp954Q7TNU5 416 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Lrp12Q8BUJ9 858 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Pqlc2Q8C4N4 293 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Irf2bp1Q8R3Y8 584 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ptov1Q91VU8 416 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 TecrQ9CY27 308 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Med29Q9DB91 199 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm28557A0A087WQQ0 336 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ifna2P01573 190 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Col9a2Q07643 688 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Znf488Q5HZG9 337 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Drd1Q61616 446 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 NovQ64299 354 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Phf13Q8K2W6 296 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr482Q8VG03 323 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Q9DAA3 117 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Klk1b5P15945 261 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cops9Q3U898 57 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ube3dQ8BX13 368 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 CdiptQ8VDP6 213 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Csnk1eQ9JMK2 416 aaKnown RBP12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 CtszQ9WUU7 306 aa12.46□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1328B1ARV2 313 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Scml2B1AVB3 969 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Itgb7P26011 806 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 CebpbP28033 296 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Rom1P32958 351 aa12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms