RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ms4a4dQ99N05 225 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Bcl2l14Q9CPT0 328 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Wnt16Q9QYS1 364 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Myo9bQ9QY06 2114 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Flg2Q2VIS4 2362 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm10097J3KMK7 105 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr62L7MU75 315 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Q3UUX7 111 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Dhrs13Q5SS80 376 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Foxf1Q61080 378 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1026Q7TR90 307 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 TbceQ8CIV8 524 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 SccpdhQ8R127 429 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Acer1Q8R4X1 273 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Sft2d2Q8VD57 159 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 D730048I06RikQ9CQB8 106 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Spry4Q9WTP2 300 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm37797A0A1D5RLC8 261 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rbm24D3Z4I3 236 aaKnown RBP14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 PtgfrP43117 366 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rps23P62267 143 aaKnown RBP14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 PilrbQ2YFS2 224 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Lclat1Q3UN02 376 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1509Q7TQQ0 308 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1230Q8VG58 305 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 FrkQ922K9 512 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 SonQ9QX47 2444 aaKnown RBP14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Qrich2A0A140LIY9 2337 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ighv5-12A0A075B5Q4 117 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1124A2AT86 318 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr905L7N1X5 310 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Kcnk3O35111 409 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 P06335 190 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 RidaP52760 135 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ube2kP61087 200 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Iqcf4Q6P8Y2 204 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr506Q7TRU6 314 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rnf122Q8BP31 155 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Nt5mQ8VCE6 220 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tmem175Q9CXY1 499 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 MvkQ9R008 395 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Xcr1Q9R0M1 322 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Psmb3Q9R1P1 205 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ighv7-1A0A075B5S2 121 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ube2dnl1A2AFH1 155 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 IfngP01580 155 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gstp1P19157 210 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 GrnP28798 589 aaKnown RBP14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ctf2P83714 204 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mesp1P97309 243 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Sdr39u1Q5M8N4 308 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tbl1xr1Q8BHJ5 514 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 SpartQ8R1X6 671 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tubg2Q8VCK3 451 aa14.05□□□□□ -0.16
Trim28-201ENSMUST00000005705 Trav15d-1-dv6d-1A0A075B624 124 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Hist1h1dP43277 221 aaKnown RBP14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 B3gat2P59270 324 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fbxw20Q5U467 468 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Plcxd3Q8BLJ3 321 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1270Q8VGP3 304 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Q9DAF8 208 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gpr34Q9R1K6 375 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rspo1Q9Z132 265 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm45692D3Z0A0 150 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm17669F6QL70 154 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm3573L7N292 184 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Slc7a15Q50E62 488 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Smug1Q6P5C5 279 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr435Q8VFS3 313 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr56Q8VGD6 315 aa14.04□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm8882E9Q7E4 283 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mdga2P60755 949 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 H2-T22Q31615 379 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 NppcQ61839 126 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Angptl6Q8R0Z6 457 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Hint2Q9D0S9 163 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 9330161L09RikQ9D253 136 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr157Q9QZ20 318 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Cldn10Q9Z0S6 231 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Usf3B2RUQ2 2221 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ighv1-78A0A0G2JGN3 117 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Adam6aB2RSY5 754 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Grk6O70293 576 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Igh-VJ558P01758 117 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Evx1P23683 416 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Slc25a4P48962 298 aaKnown RBP14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Slc45a2P58355 530 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 BaxQ07813 192 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Sft2d1Q5SSN7 159 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Npy4rQ61041 375 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Stk17bQ8BG48 372 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Adprhl1Q8BGK2 353 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm9837Q8C607 126 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Scgb2b27Q8R1E9 112 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr916Q8VG53 310 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Jag2Q9QYE5 1247 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mapk7Q9WVS8 806 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Arfgef3Q3UGY8 2170 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Trav5-4A0A075B652 114 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm45808A0A1B0GSH8 263 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms