RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 NATD1Q8N6N6 113 aa0.19□□□□□ -2.38
CCDC7-211ENST00000638889 TMEM239Q8WW34 195 aa0.19□□□□□ -2.38
CCDC7-211ENST00000638889 PRRG3Q9BZD7 231 aa0.19□□□□□ -2.38
CCDC7-211ENST00000638889 RAB1BQ9H0U4 201 aa0.19□□□□□ -2.38
CCDC7-211ENST00000638889 UBQLN4Q9NRR5 601 aa0.19□□□□□ -2.38
CCDC7-211ENST00000638889 RABL2AQ9UBK7 228 aaPredicted RBP0.19□□□□□ -2.38
CCDC7-211ENST00000638889 BRWD1Q9NSI6 2320 aa0.19□□□□□ -2.38
CCDC7-211ENST00000638889 GPR98Q8WXG9 6306 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 GSTZ1O43708 216 aaPredicted RBP0.18□□□□□ -2.38
CCDC7-211ENST00000638889 KLRC4O43908 158 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 NPPAP01160 153 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 HERVK_113P63121 156 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 XIAPP98170 497 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 GNA12Q03113 381 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 RAB31Q13636 194 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 ELOBQ15370 118 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 XKRXQ6PP77 449 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 DAND5Q8N907 189 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 SLC7A6Q92536 515 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 LRRC39Q96DD0 335 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 UGT2B28Q9BY64 529 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 TTTY13Q9BZ97 58 aa0.18□□□□□ -2.38
CCDC7-211ENST00000638889 IGHV1-18A0A0C4DH31 117 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 SCN2BO60939 215 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 UGT2B11O75310 529 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 LDOC1O95751 146 aaPredicted RBP0.17□□□□□ -2.38
CCDC7-211ENST00000638889 CST4P01036 141 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 CD79BP40259 229 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 CA7P43166 264 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 GABRA2P47869 451 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 EVX1P49640 407 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 MESTQ5EB52 335 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 SCGB1D4Q6XE38 83 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 FAM19A2Q8N3H0 131 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 RNASE6Q93091 150 aaKnown RBP0.17□□□□□ -2.38
CCDC7-211ENST00000638889 HBEGFQ99075 208 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 POLR3HQ9Y535 204 aaPredicted RBP0.17□□□□□ -2.38
CCDC7-211ENST00000638889 KIAA0232Q92628 1395 aa0.17□□□□□ -2.38
CCDC7-211ENST00000638889 ANKRD17O75179 2603 aaKnown RBP0.17□□□□□ -2.38
CCDC7-211ENST00000638889 NPATQ14207 1427 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 A0A0D9SEW6 157 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 MRASO14807 208 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 GEMIN2O14893 280 aaKnown RBP0.16□□□□□ -2.38
CCDC7-211ENST00000638889 SGCEO43556 437 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 LIMS3P0CW19 117 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 LIMS4P0CW20 117 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 DEFA4P12838 97 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 NQO2P16083 231 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 ADORA1P30542 326 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 CDK9P50750 372 aaKnown RBP0.16□□□□□ -2.38
CCDC7-211ENST00000638889 EMP1P54849 157 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 FAM173BQ6P4H8 233 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 ATP5L2Q7Z4Y8 100 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 ZNF675Q8TD23 568 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 CCDC127Q96BQ5 260 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 CPNE2Q96FN4 548 aaPredicted RBP0.16□□□□□ -2.38
CCDC7-211ENST00000638889 SFRP2Q96HF1 295 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 OR7D2Q96RA2 312 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 EIF5A2Q9GZV4 153 aaKnown RBP0.16□□□□□ -2.38
CCDC7-211ENST00000638889 TMEM222Q9H0R3 208 aa0.16□□□□□ -2.38
CCDC7-211ENST00000638889 PTPRBP23467 1997 aa0.15□□□□□ -2.38
CCDC7-211ENST00000638889 PCDH15Q96QU1 1955 aa0.15□□□□□ -2.38
CCDC7-211ENST00000638889 USP24Q9UPU5 2620 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 ORC5O43913 435 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 ARL6IP5O75915 188 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 ASS1P00966 412 aaKnown RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 AGTR1P30556 359 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 CA5AP35218 305 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 CRATP43155 626 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 PSMD7P51665 324 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 TPI1P60174 286 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 BTN3A2P78410 334 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 USF2Q15853 346 aaPredicted RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 MIAQ16674 131 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 TMEM249Q2WGJ8 235 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 SPATA31B1PQ5VZV4 182 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 ZNF705AQ6ZN79 300 aaPredicted RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 C1orf174Q8IYL3 243 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 LRRC34Q8IZ02 419 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 ST13P4Q8IZP2 240 aaPredicted RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 DYNAPQ8N1N2 210 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 TMEM56Q96MV1 263 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 FAM210AQ96ND0 272 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 MRM2Q9UI43 246 aaKnown RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 ENPP5Q9UJA9 477 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 RBM7Q9Y580 266 aaKnown RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 TIMM9Q9Y5J7 89 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 SMARCA4P51532 1647 aa0.15□□□□□ -2.39
CCDC7-211ENST00000638889 NUP153P49790 1475 aaKnown RBP0.15□□□□□ -2.39
CCDC7-211ENST00000638889 A0A087WUU8 490 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 HBZP02008 142 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 PSMB8P28062 276 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 DAD1P61803 113 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 TNNC1P63316 161 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 TMEM267Q0VDI3 215 aaPredicted RBP0.14□□□□□ -2.39
CCDC7-211ENST00000638889 EXOC3L4Q17RC7 722 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 PLPPR5Q32ZL2 321 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.14□□□□□ -2.39
CCDC7-211ENST00000638889 DCXRQ7Z4W1 244 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 BAP18Q8IXM2 172 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms