RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 LINC00205P59089 165 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 ERVFC1-1P60608 527 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 CST9LP1Q5W188 147 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 SPINK14Q6IE38 97 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 KIR2DL5AQ8N109 375 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 ZNF576Q9H609 170 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 GRIFINA4D1Z8 144 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 COX5BP10606 129 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 CDC34P49427 236 aaPredicted RBP12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 TMEM144Q7Z5S9 345 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 SPEM1Q8N4L4 309 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 DTD1Q8TEA8 209 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 MRPS17Q9Y2R5 130 aaKnown RBP12.59□□□□□ -0.39
THUMPD1-206ENST00000636554 IGKV3D-15A0A087WSY6 115 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 K7ESF4 209 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 RBFOX2O43251 390 aaKnown RBP eCLIP12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 NDUFB4O95168 129 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 MBP02144 154 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 TDGF1P3P51864 188 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 LCN2P80188 198 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 C1orf194Q5T5A4 169 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 PPP1R32Q7Z5V6 425 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 SDSLQ96GA7 329 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 TMEM204Q9BSN7 226 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 LINC00470Q9BZP3 86 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 J3QT63 122 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 M0R143 59 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 SYNGR4O95473 234 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 MT-CO3P00414 261 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 P0C879 139 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 BTF3P20290 206 aaKnown RBP12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 HNF1AP20823 631 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 TMEM68Q96MH6 324 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 MPC1Q9Y5U8 109 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 PXMP4Q9Y6I8 212 aa12.58□□□□□ -0.4
THUMPD1-206ENST00000636554 NBEAQ8NFP9 2946 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 TRBV20OR9-2A0A075B6H5 130 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 ADMP35318 185 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 Q8N7P7 452 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF709Q8N972 641 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 WDYHV1Q96HA8 205 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 HES7Q9BYE0 225 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 PKIBQ9C010 78 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 TMEM210A6NLX4 147 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 A6NNC1 897 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 RBMXL2O75526 392 aaKnown RBP12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 RAB4AP20338 218 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 C3AR1Q16581 482 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 TDRG1Q3Y452 100 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 NUFIP2Q7Z417 695 aaKnown RBP12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF645Q8N7E2 425 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 SGMS2Q8NHU3 365 aa12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 MBNL3Q9NUK0 354 aaKnown RBP12.57□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF25P17030 456 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 OR3A1P47881 315 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 CYB561P49447 251 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 LHX2P50458 406 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 SCCPDHQ8NBX0 429 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 TBX15Q96SF7 602 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 MUC3AQ02505 3323 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 RNF212BA8MTL3 300 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 CDIPTO14735 213 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 TFF1P04155 84 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 COL8A2P25067 703 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 CLDN18P56856 261 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 MSMO1Q15800 293 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 URB1O60287 2271 aaKnown RBP12.56□□□□□ -0.4
THUMPD1-206ENST00000636554 PSPNO60542 156 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 CD82P27701 267 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 EDDM3BP56851 147 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 PLP2Q04941 152 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 ELOVL5Q9NYP7 299 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 TP53TG3Q9ULZ0 132 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 COL6A3P12111 3177 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 FAM166BA8MTA8 275 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 NXPH2O95156 264 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 VWC2Q2TAL6 325 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 SFRP2Q96HF1 295 aa12.55□□□□□ -0.4
THUMPD1-206ENST00000636554 TMPRSS2O15393 492 aa12.54□□□□□ -0.4
THUMPD1-206ENST00000636554 OR10J1P30954 320 aa12.54□□□□□ -0.4
THUMPD1-206ENST00000636554 ARR3P36575 388 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms