RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ZNF383Q8NA42 475 aa12.31□□□□□ -0.44
CLN6-211ENST00000635754 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
CLN6-211ENST00000635754 ADTRPQ96IZ2 230 aa12.31□□□□□ -0.44
CLN6-211ENST00000635754 PLSCR3Q9NRY6 295 aa12.31□□□□□ -0.44
CLN6-211ENST00000635754 SERTAD4Q9NUC0 356 aa12.31□□□□□ -0.44
CLN6-211ENST00000635754 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
CLN6-211ENST00000635754 KLK11Q9UBX7 282 aa12.31□□□□□ -0.44
CLN6-211ENST00000635754 MTFP1Q9UDX5 166 aa12.31□□□□□ -0.44
CLN6-211ENST00000635754 SH2D7A6NKC9 451 aaPredicted RBP12.3□□□□□ -0.44
CLN6-211ENST00000635754 F2RL1P55085 397 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 LINC00205P59089 165 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 FXYD4P59646 89 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 DGCR2P98153 550 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
CLN6-211ENST00000635754 CBX3Q13185 183 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 Q8N9W7 124 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 SECTM1Q8WVN6 248 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
CLN6-211ENST00000635754 FABP12A6NFH5 140 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 CTDSPLO15194 276 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 NBR2O15453 112 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
CLN6-211ENST00000635754 TSPAN5P62079 268 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 TMEM95Q3KNT9 176 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 FOXB2Q5VYV0 432 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 DHRS11Q6UWP2 260 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 TMEM17Q86X19 198 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 KLHDC1Q8N7A1 406 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 OR6F1Q8NGZ6 308 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 SMIM4Q8WVI0 70 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 RITA1Q96K30 269 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 RNF5Q99942 180 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 ZNF2Q9BSG1 426 aaPredicted RBP12.29□□□□□ -0.44
CLN6-211ENST00000635754 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 KIAA1456Q9P272 454 aa12.29□□□□□ -0.44
CLN6-211ENST00000635754 RBMX2Q9Y388 322 aaKnown RBP12.29□□□□□ -0.44
CLN6-211ENST00000635754 IGLV2-14P01704 120 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 RRASP10301 218 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 TBPP20226 339 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 CNTFRP26992 372 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 SSBP1Q04837 148 aaKnown RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 MSMO1Q15800 293 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 RNASE10Q5GAN6 216 aaKnown RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 ZNF660Q6AZW8 331 aaPredicted RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 FLYWCH2Q96CP2 140 aaKnown RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 HSD17B10Q99714 261 aaKnown RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 LINC00473A8K010 186 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 IGKV1-16P04430 117 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 RPS16P62249 146 aaKnown RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 VAX1Q5SQQ9 334 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 SLC35E3Q7Z769 313 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 BVESQ8NE79 360 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 NPBQ8NG41 125 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 DDB2Q92466 427 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 MOB3AQ96BX8 217 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
CLN6-211ENST00000635754 CCL28Q9NRJ3 127 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 TAS2R8Q9NYW2 309 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 PRELID3BQ9Y3B1 194 aa12.28□□□□□ -0.44
CLN6-211ENST00000635754 M0QYG6 137 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 NDUFA3O95167 84 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 IGHG2P01859 326 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 CD3DP04234 171 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 IFNA6P05013 189 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 TAS2R19P59542 299 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 PLGLAQ15195 96 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 TMEM229BQ8NBD8 167 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 ZBTB34Q8NCN2 500 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 CITED1Q99966 193 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 SOSTQ9BQB4 213 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 WNT10AQ9GZT5 417 aa12.27□□□□□ -0.45
CLN6-211ENST00000635754 ZNF107Q9UII5 783 aaPredicted RBP12.27□□□□□ -0.45
CLN6-211ENST00000635754 RRHO14718 337 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 KCNAB3O43448 404 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 GSTZ1O43708 216 aaPredicted RBP12.26□□□□□ -0.45
CLN6-211ENST00000635754 SPDEFO95238 335 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 CSF1P09603 554 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 KRTAP10-3P60369 221 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 SRSF4Q08170 494 aaKnown RBP12.26□□□□□ -0.45
CLN6-211ENST00000635754 ZNF66Q6ZN08 573 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 ZNF818PQ6ZRF7 136 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 FOXRED2Q8IWF2 684 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 ARRDC1Q8N5I2 433 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 TCTEX1D2Q8WW35 142 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 HARBI1Q96MB7 349 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 FXYD6Q9H0Q3 95 aa12.26□□□□□ -0.45
CLN6-211ENST00000635754 SHOXO15266 292 aa12.25□□□□□ -0.45
CLN6-211ENST00000635754 TNFSF12O43508 249 aa12.25□□□□□ -0.45
CLN6-211ENST00000635754 FCGR3BO75015 233 aa12.25□□□□□ -0.45
CLN6-211ENST00000635754 RAB3DO95716 219 aa12.25□□□□□ -0.45
CLN6-211ENST00000635754 CRYZL1O95825 349 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms