RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 METRNQ9UJH8 293 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 TUBD1Q9UJT1 453 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 A0A1W2PPE3 182 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 C7orf71A4D174 169 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 EREGO14944 169 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 HOXB1P14653 301 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF324BQ6AW86 544 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-209ENST00000635750 FAM216AQ8WUB2 273 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 NEU4Q8WWR8 484 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-209ENST00000635750 SLC6A13Q9NSD5 602 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 OR5AC2Q9NZP5 309 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 CTSVO60911 334 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 TMEM42Q69YG0 159 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 HAPLN4Q86UW8 402 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 DTX1Q86Y01 620 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 ABHD12Q8N2K0 398 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 OR1K1Q8NGR3 316 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 SSBP3Q9BWW4 388 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-209ENST00000635750 YBX2Q9Y2T7 364 aaKnown RBP4.82□□□□□ -1.64
SCN1A-209ENST00000635750 DOPEY2Q9Y3R5 2298 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 SYNGR3O43761 229 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 MYOD1P15172 320 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 PAX1P15863 534 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 MPV17P39210 176 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 RSPO4Q2I0M5 234 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-209ENST00000635750 OR4D5Q8NGN0 318 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 SCMH1Q96GD3 660 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 AICDAQ9GZX7 198 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 IL36RNQ9UBH0 155 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 ABCA3Q99758 1704 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 DOCK10Q96BY6 2186 aa4.82□□□□□ -1.64
SCN1A-209ENST00000635750 OR4C45A6NMZ5 311 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 NKX2-8O15522 239 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 MT-ND6P03923 174 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 APOBEC3AP31941 199 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 PCOLCEQ15113 449 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 GVQW1Q8N7I0 195 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 SEMA5BQ9P283 1151 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 ZNF107Q9UII5 783 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 KCNK7Q9Y2U2 307 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 HMSDA8MTL9 139 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TSPAN2O60636 221 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 HOXD3P31249 432 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 RAG2P55895 527 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 SERF2P84101 59 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 ISXQ2M1V0 245 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 MAVSQ7Z434 540 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CLDND2Q8NHS1 167 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 DNAJC4Q9NNZ3 241 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 AKIP1Q9NQ31 210 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CALYQ9NYX4 217 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 IGHV3OR16-10A0A075B7F0 116 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TCRBV4S1A1TA0A5B7 111 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 PRR32B1ATL7 298 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 FXYD3Q14802 87 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CEACAM21Q3KPI0 293 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TMEM177Q53S58 311 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 C10orf111Q8N326 155 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 ITLN1Q8WWA0 313 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 C1QTNF9BB2RNN3 333 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CTGFP29279 349 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CMC4P56277 68 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 FAM3BP58499 235 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 PMCHL1Q16048 86 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 OR51G1Q8NGK1 321 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 ABHD1Q96SE0 405 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 AMY1AP04745 511 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TDGF1P3P51864 188 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 PRSS41Q7RTY9 318 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CADM3Q8N126 398 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 FAM57AQ8TBR7 257 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 DSPPQ9NZW4 1301 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 SIGLEC1Q9BZZ2 1709 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TRBV20OR9-2A0A075B6H5 130 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 LEPROTL1O95214 131 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 RPL32P62910 135 aaKnown RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TMEM186Q96B77 213 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 C19orf24Q9BVV8 132 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 IFT22Q9H7X7 185 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 MRPL16Q9NX20 251 aaKnown RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 FRRS1LQ9P0K9 344 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TNFSF18Q9UNG2 199 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 DOCK6Q96HP0 2047 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CACNA1DQ01668 2161 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 PTP4A3O75365 173 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CEACAM8P31997 349 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 EWSR1Q01844 656 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCN1A-209ENST00000635750 SAPCD1Q5SSQ6 148 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 LDLRAD2Q5SZI1 272 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 C12orf73Q69YU5 71 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 TCF23Q7RTU1 214 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 CHST5Q9GZS9 411 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 FAM206AQ9NX38 181 aa4.81□□□□□ -1.64
SCN1A-209ENST00000635750 PKD1L3Q7Z443 1732 aa4.8□□□□□ -1.64
SCN1A-209ENST00000635750 TRAV21A0A0B4J279 112 aa4.8□□□□□ -1.64
SCN1A-209ENST00000635750 ANKRD20A5PA0PJZ0 165 aa4.8□□□□□ -1.64
SCN1A-209ENST00000635750 SOCS1O15524 211 aa4.8□□□□□ -1.64
SCN1A-209ENST00000635750 OGG1O15527 345 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms