RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 COMMD3Q9UBI1 195 aa8.71□□□□□ -1.02
DDX41-219ENST00000629036 ZNF221Q9UK13 617 aa8.71□□□□□ -1.02
DDX41-219ENST00000629036 COL7A1Q02388 2944 aa8.71□□□□□ -1.02
DDX41-219ENST00000629036 PSMB11A5LHX3 300 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 SRRM4A7MD48 611 aaKnown RBP8.7□□□□□ -1.02
DDX41-219ENST00000629036 AP4M1O00189 453 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 FCN1O00602 326 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 ATP6V0E1O15342 81 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 RBBP9O75884 186 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 CSF1P09603 554 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 CTXN2P0C2S0 81 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 ZNF182P17025 639 aaPredicted RBP8.7□□□□□ -1.02
DDX41-219ENST00000629036 PPIFP30405 207 aaKnown RBP8.7□□□□□ -1.02
DDX41-219ENST00000629036 MC5RP33032 325 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 SOX6P35712 828 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 RORCP51449 518 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
DDX41-219ENST00000629036 PSG5Q15238 335 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 C18orf65Q6ZTR6 163 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 OVCH2Q7RTZ1 564 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 PDPNQ86YL7 162 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 CLVS1Q8IUQ0 354 aaPredicted RBP8.7□□□□□ -1.02
DDX41-219ENST00000629036 ZNF645Q8N7E2 425 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 CHPT1Q8WUD6 406 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 S100A16Q96FQ6 103 aaKnown RBP8.7□□□□□ -1.02
DDX41-219ENST00000629036 BCL7BQ9BQE9 202 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 FBXL15Q9H469 300 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 ADAM30Q9UKF2 790 aa8.7□□□□□ -1.02
DDX41-219ENST00000629036 H3BMQ9 156 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 SOX15O60248 233 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 SPDEFO95238 335 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 IGHG4P01861 327 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 OPN1MWP04001 364 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 FCER2P06734 321 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 OPN1MW2P0DN77 364 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 OPN1MW3P0DN78 364 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 AADACP22760 399 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 PSMB8P28062 276 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 RPL5P46777 297 aaKnown RBP8.69□□□□□ -1.02
DDX41-219ENST00000629036 TMBIM6P55061 237 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 KIAA0141Q14154 515 aaPredicted RBP8.69□□□□□ -1.02
DDX41-219ENST00000629036 NSUN5P1Q3KNT7 163 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 ARSJQ5FYB0 599 aaPredicted RBP8.69□□□□□ -1.02
DDX41-219ENST00000629036 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 CENPVQ7Z7K6 275 aaPredicted RBP8.69□□□□□ -1.02
DDX41-219ENST00000629036 LYSMD2Q8IV50 215 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 OR5AP2Q8NGF4 316 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 RAB2BQ8WUD1 216 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 ISOC1Q96CN7 298 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 RNF5Q99942 180 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 RASL11BQ9BPW5 248 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 OR51J1Q9H342 316 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 SLC35D1Q9NTN3 355 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 RBMX2Q9Y388 322 aaKnown RBP8.69□□□□□ -1.02
DDX41-219ENST00000629036 CEPT1Q9Y6K0 416 aa8.69□□□□□ -1.02
DDX41-219ENST00000629036 G3V318 75 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 ARPC1BO15143 372 aaKnown RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 OR5H8P0DN80 308 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 CBX5P45973 191 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 THBS3P49746 956 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 LUMP51884 338 aaPredicted RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 RPL23AP62750 156 aaKnown RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 CX3CL1P78423 397 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 MSMO1Q15800 293 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 FOXRED2Q8IWF2 684 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 LAX1Q8IWV1 398 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 MINDY2Q8NBR6 621 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 BVESQ8NE79 360 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 OR4X2Q8NGF9 303 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 FAM110DQ8TAY7 271 aaPredicted RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 GPHA2Q96T91 129 aa8.68□□□□□ -1.02
DDX41-219ENST00000629036 SLIRPQ9GZT3 109 aaKnown RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 CCDC59Q9P031 241 aaKnown RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 TSSC4Q9Y5U2 329 aaPredicted RBP8.68□□□□□ -1.02
DDX41-219ENST00000629036 TCRBV4S1A1TA0A5B7 111 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 H7C2Y5 167 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 J3QRK9 145 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 CTDSP2O14595 271 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 SLC25A17O43808 307 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 PEX14O75381 377 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 PPYP01298 95 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 APOA2P02652 100 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 FCGR2CP31995 323 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 PJVKQ0ZLH3 352 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 FOXE3Q13461 319 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 DYRK1AQ13627 763 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 CDK10Q15131 360 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 LIN54Q6MZP7 749 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 GIMAP1Q8WWP7 306 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 ABHD1Q96SE0 405 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 NXF2Q9GZY0 626 aaKnown RBP8.67□□□□□ -1.02
DDX41-219ENST00000629036 FXYD6Q9H0Q3 95 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 SCPEP1Q9HB40 452 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 NECAP2Q9NVZ3 263 aa8.67□□□□□ -1.02
DDX41-219ENST00000629036 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
DDX41-219ENST00000629036 CA2P00918 260 aa8.66□□□□□ -1.02
DDX41-219ENST00000629036 RPLP1P05386 114 aaKnown RBP8.66□□□□□ -1.02
DDX41-219ENST00000629036 PRSS3P35030 304 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms