RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 RAB22AQ9UL26 194 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 RNF150Q9ULK6 438 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 TRAV1-2A0A0B4J238 106 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 SHISA3A0PJX4 238 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 OVOL1O14753 267 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 ACTBL2Q562R1 376 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 HES5Q5TA89 166 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 ZNF429Q86V71 674 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 PPP1R27Q86WC6 154 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 NDUFB11Q9NX14 153 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 BLOC1S6Q9UL45 172 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 A3GALT2U3KPV4 340 aa17.01■□□□□ 0.31
SRRT-218ENST00000620394 LYSTQ99698 3801 aa17■□□□□ 0.31
SRRT-218ENST00000620394 LINC01619G3V211 115 aa17■□□□□ 0.31
SRRT-218ENST00000620394 MFNGO00587 321 aa17■□□□□ 0.31
SRRT-218ENST00000620394 FABP7O15540 132 aa17■□□□□ 0.31
SRRT-218ENST00000620394 CA2P00918 260 aa17■□□□□ 0.31
SRRT-218ENST00000620394 APOA2P02652 100 aa17■□□□□ 0.31
SRRT-218ENST00000620394 FCGR3AP08637 254 aa17■□□□□ 0.31
SRRT-218ENST00000620394 LINC00205P59089 165 aa17■□□□□ 0.31
SRRT-218ENST00000620394 MOGAT2Q3SYC2 334 aa17■□□□□ 0.31
SRRT-218ENST00000620394 IZUMO2Q6UXV1 221 aa17■□□□□ 0.31
SRRT-218ENST00000620394 ABHD5Q8WTS1 349 aa17■□□□□ 0.31
SRRT-218ENST00000620394 CASTOR1Q8WTX7 329 aa17■□□□□ 0.31
SRRT-218ENST00000620394 RAB3CQ96E17 227 aa17■□□□□ 0.31
SRRT-218ENST00000620394 FAM103A1Q9BTL3 118 aaKnown RBP17■□□□□ 0.31
SRRT-218ENST00000620394 GAR1Q9NY12 217 aaKnown RBP17■□□□□ 0.31
SRRT-218ENST00000620394 IGHV4OR15-8A0A075B7B6 117 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 A0A087WW49 117 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 IFITM5A6NNB3 132 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 RAB27BO00194 218 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 CD3GP09693 182 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 SNRPBP14678 240 aaKnown RBP16.99■□□□□ 0.31
SRRT-218ENST00000620394 OR10A3P58181 314 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 SSBP2P81877 361 aaPredicted RBP16.99■□□□□ 0.31
SRRT-218ENST00000620394 UNQ5815/PRO19632Q6UWF5 114 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 LFNGQ8NES3 379 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 ARPC1AQ92747 370 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 DLX4Q92988 240 aaPredicted RBP16.99■□□□□ 0.31
SRRT-218ENST00000620394 SLA2Q9H6Q3 261 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 ZMAT4Q9H898 229 aa16.99■□□□□ 0.31
SRRT-218ENST00000620394 TRBV6-7A0A0A0MS04 114 aa16.98■□□□□ 0.31
SRRT-218ENST00000620394 PDCD5O14737 125 aa16.98■□□□□ 0.31
SRRT-218ENST00000620394 RAB6AP20340 208 aa16.98■□□□□ 0.31
SRRT-218ENST00000620394 SLURP1P55000 103 aa16.98■□□□□ 0.31
SRRT-218ENST00000620394 OR10R2Q8NGX6 335 aa16.98■□□□□ 0.31
SRRT-218ENST00000620394 FLYWCH2Q96CP2 140 aaKnown RBP16.98■□□□□ 0.31
SRRT-218ENST00000620394 CITED4Q96RK1 184 aa16.98■□□□□ 0.31
SRRT-218ENST00000620394 TRDV1A0A1B0GX56 115 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 ERICH4A6NGS2 130 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 M0R1X1 148 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 ARPC1BO15143 372 aaKnown RBP16.97■□□□□ 0.31
SRRT-218ENST00000620394 SLC25A17O43808 307 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 IGLV2-23P01705 113 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 HIST1H1DP16402 221 aaKnown RBP16.97■□□□□ 0.31
SRRT-218ENST00000620394 GALP22466 123 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 RPS16P62249 146 aaKnown RBP16.97■□□□□ 0.31
SRRT-218ENST00000620394 MRPS15P82914 257 aaKnown RBP16.97■□□□□ 0.31
SRRT-218ENST00000620394 IGSF11Q5DX21 431 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 C5orf30Q96GV9 206 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 CNBD2Q96M20 576 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 CLCC1Q96S66 551 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 OR2D2Q9H210 308 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 SLC35D1Q9NTN3 355 aa16.97■□□□□ 0.31
SRRT-218ENST00000620394 H3BUA1 57 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 CRYGBP07316 175 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 GADD45AP24522 165 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 MYL9P24844 172 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 TPPP2P59282 170 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 SRSF7Q16629 238 aaKnown RBP eCLIP16.96■□□□□ 0.31
SRRT-218ENST00000620394 ACSM6Q6P461 480 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 Q6ZS49 121 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 OR10J5Q8NHC4 309 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 RHOVQ96L33 236 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 SDHAF2Q9NX18 166 aa16.96■□□□□ 0.31
SRRT-218ENST00000620394 BET1O15155 118 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 SAP30O75446 220 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 HSPB1P04792 205 aaKnown RBP16.95■□□□□ 0.3
SRRT-218ENST00000620394 FRMD6-AS1P0C7T7 363 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 GSTT2P0CG29 244 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 GSTT2BP0CG30 244 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 GNB3P16520 340 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 LGALS7P47929 136 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 GABARAPL2P60520 117 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 FXYD3Q14802 87 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 NR2C2APQ86WQ0 139 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 RAB26Q9ULW5 256 aa16.95■□□□□ 0.3
SRRT-218ENST00000620394 TNCP24821 2201 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 DNAH1Q9P2D7 4330 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 MRPS14O60783 128 aaKnown RBP16.94■□□□□ 0.3
SRRT-218ENST00000620394 IGHV3-11P01762 117 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 OR8U9P0C7N5 309 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 RAB3BP20337 219 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 CD40LGP29965 261 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 TAGLNQ01995 201 aaKnown RBP16.94■□□□□ 0.3
SRRT-218ENST00000620394 TMEM177Q53S58 311 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 OVCH2Q7RTZ1 564 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 POC5Q8NA72 575 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 GRPEL2Q8TAA5 225 aa16.94■□□□□ 0.3
SRRT-218ENST00000620394 BRI3O95415 125 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms